Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 BX005266.1-201ENST00000473402 457 ntBASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDF1Q96CC6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 NKAPP1-205ENST00000585790 367 ntBASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDF1Q96CC6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 AC091304.2-201ENST00000564639 760 ntBASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 PRELID1P1-202ENST00000567272 903 ntBASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 MTDHP3-201ENST00000594186 672 ntBASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 AL355877.3-201ENST00000622820 899 ntBASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 AL139288.1-201ENST00000623748 933 ntBASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 AL022326.1-202ENST00000641533 845 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms