Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 AC098614.1-201ENST00000368528 745 ntBASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 DGCR5-201ENST00000399539 862 ntBASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 MIR1909-201ENST00000411312 80 ntBASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 MIR3909-201ENST00000579518 119 ntBASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM43Q96BQ3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRIM43Q96BQ3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.46■□□□□ 0.54
TRIM43Q96BQ3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM43Q96BQ3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 ACA64.2-201ENST00000459014 129 ntBASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 AL844908.2-201ENST00000609461 460 ntBASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 AC004840.1-201ENST00000636359 365 ntBASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM43Q96BQ3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms