Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC29.3■■■□□ 2.28
TRIM41Q8WV44 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
TRIM41Q8WV44 NOC2LP2-201ENST00000407594 1944 ntBASIC29.3■■■□□ 2.28
TRIM41Q8WV44 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC29.3■■■□□ 2.28
TRIM41Q8WV44 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC29.3■■■□□ 2.28
TRIM41Q8WV44 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC29.3■■■□□ 2.28
TRIM41Q8WV44 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC29.3■■■□□ 2.28
TRIM41Q8WV44 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC29.3■■■□□ 2.28
TRIM41Q8WV44 ELK2AP-201ENST00000392510 1007 ntBASIC29.3■■■□□ 2.28
TRIM41Q8WV44 MIR1909-201ENST00000411312 80 ntBASIC29.3■■■□□ 2.28
TRIM41Q8WV44 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC29.3■■■□□ 2.28
TRIM41Q8WV44 FAM8A2P-201ENST00000528813 1142 ntBASIC29.3■■■□□ 2.28
TRIM41Q8WV44 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC29.3■■■□□ 2.28
TRIM41Q8WV44 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC29.3■■■□□ 2.28
TRIM41Q8WV44 AC017083.2-201ENST00000608069 979 ntBASIC29.3■■■□□ 2.28
TRIM41Q8WV44 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC29.3■■■□□ 2.28
TRIM41Q8WV44 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
TRIM41Q8WV44 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
TRIM41Q8WV44 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
TRIM41Q8WV44 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
TRIM41Q8WV44 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TRIM41Q8WV44 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC29.29■■■□□ 2.28
TRIM41Q8WV44 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TRIM41Q8WV44 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TRIM41Q8WV44 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC29.29■■■□□ 2.28
TRIM41Q8WV44 AL133373.2-201ENST00000623187 2828 ntBASIC29.29■■■□□ 2.28
TRIM41Q8WV44 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TRIM41Q8WV44 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
TRIM41Q8WV44 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TRIM41Q8WV44 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TRIM41Q8WV44 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TRIM41Q8WV44 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC29.29■■■□□ 2.28
TRIM41Q8WV44 ACTG1P4-201ENST00000425123 1122 ntBASIC29.29■■■□□ 2.28
TRIM41Q8WV44 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC29.29■■■□□ 2.28
TRIM41Q8WV44 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC29.29■■■□□ 2.28
TRIM41Q8WV44 MIR4751-201ENST00000578027 74 ntBASIC29.29■■■□□ 2.28
TRIM41Q8WV44 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
TRIM41Q8WV44 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TRIM41Q8WV44 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
TRIM41Q8WV44 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
TRIM41Q8WV44 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TRIM41Q8WV44 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TRIM41Q8WV44 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC29.28■■■□□ 2.28
TRIM41Q8WV44 AC068880.1-201ENST00000507289 2297 ntBASIC29.28■■■□□ 2.28
TRIM41Q8WV44 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
TRIM41Q8WV44 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
TRIM41Q8WV44 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
TRIM41Q8WV44 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC29.28■■■□□ 2.28
TRIM41Q8WV44 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
TRIM41Q8WV44 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
TRIM41Q8WV44 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
TRIM41Q8WV44 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
TRIM41Q8WV44 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC29.28■■■□□ 2.28
TRIM41Q8WV44 HCG4B-203ENST00000450128 991 ntBASIC29.28■■■□□ 2.28
TRIM41Q8WV44 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
TRIM41Q8WV44 VPS29-207ENST00000549970 818 ntTSL 3 BASIC29.28■■■□□ 2.28
TRIM41Q8WV44 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC29.28■■■□□ 2.28
TRIM41Q8WV44 NAA38-206ENST00000576384 424 ntTSL 2 BASIC29.28■■■□□ 2.28
TRIM41Q8WV44 CITED2-204ENST00000618718 901 ntTSL 2 BASIC29.28■■■□□ 2.28
TRIM41Q8WV44 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC29.28■■■□□ 2.28
TRIM41Q8WV44 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC29.28■■■□□ 2.28
TRIM41Q8WV44 AC067852.2-201ENST00000590513 2313 ntBASIC29.28■■■□□ 2.28
TRIM41Q8WV44 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC29.27■■■□□ 2.28
TRIM41Q8WV44 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
TRIM41Q8WV44 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
TRIM41Q8WV44 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
TRIM41Q8WV44 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
TRIM41Q8WV44 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC29.27■■■□□ 2.28
TRIM41Q8WV44 AC092506.1-202ENST00000401022 528 ntBASIC29.27■■■□□ 2.28
TRIM41Q8WV44 NABP1-203ENST00000409510 843 ntTSL 5 BASIC29.27■■■□□ 2.28
TRIM41Q8WV44 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC29.27■■■□□ 2.28
TRIM41Q8WV44 VN2R19P-201ENST00000442399 1052 ntBASIC29.27■■■□□ 2.28
TRIM41Q8WV44 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC29.27■■■□□ 2.28
TRIM41Q8WV44 RPS15P9-201ENST00000494093 319 ntBASIC29.27■■■□□ 2.28
TRIM41Q8WV44 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC29.27■■■□□ 2.28
TRIM41Q8WV44 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
TRIM41Q8WV44 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
TRIM41Q8WV44 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC29.27■■■□□ 2.28
TRIM41Q8WV44 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
TRIM41Q8WV44 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.28
TRIM41Q8WV44 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
TRIM41Q8WV44 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
TRIM41Q8WV44 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC29.26■■■□□ 2.28
TRIM41Q8WV44 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
TRIM41Q8WV44 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC29.26■■■□□ 2.27
TRIM41Q8WV44 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
TRIM41Q8WV44 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC29.26■■■□□ 2.27
TRIM41Q8WV44 PTCHD3P3-201ENST00000403073 906 ntBASIC29.26■■■□□ 2.27
TRIM41Q8WV44 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC29.26■■■□□ 2.27
TRIM41Q8WV44 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC29.26■■■□□ 2.27
TRIM41Q8WV44 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC29.26■■■□□ 2.27
TRIM41Q8WV44 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
TRIM41Q8WV44 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC29.26■■■□□ 2.27
TRIM41Q8WV44 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC29.26■■■□□ 2.27
TRIM41Q8WV44 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
TRIM41Q8WV44 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
TRIM41Q8WV44 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC29.25■■■□□ 2.27
TRIM41Q8WV44 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC29.25■■■□□ 2.27
TRIM41Q8WV44 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC29.25■■■□□ 2.27
TRIM41Q8WV44 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC29.25■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms