Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 PMS2P7-201ENST00000506558 1336 ntBASIC17.24■□□□□ 0.35
CHD5Q8TDI0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 HCG4-201ENST00000418983 998 ntBASIC17.24■□□□□ 0.35
CHD5Q8TDI0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD5Q8TDI0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 AL009183.1-201ENST00000603760 355 ntBASIC17.23■□□□□ 0.35
CHD5Q8TDI0 AC023141.13-201ENST00000604991 943 ntBASIC17.23■□□□□ 0.35
CHD5Q8TDI0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CHD5Q8TDI0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 AC092865.5-201ENST00000545435 363 ntBASIC17.22■□□□□ 0.35
CHD5Q8TDI0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 AC096734.2-201ENST00000562054 433 ntBASIC17.22■□□□□ 0.35
CHD5Q8TDI0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
CHD5Q8TDI0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHD5Q8TDI0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms