Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 RNF216P1-203ENST00000404404 2427 ntBASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB3IL1Q8TBN0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 AC034232.1-201ENST00000506026 1064 ntBASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 AC092068.3-201ENST00000587894 2016 ntBASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.18■□□□□ 0.34
RAB3IL1Q8TBN0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 MIR1238-201ENST00000408483 83 ntBASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 AL355075.4-201ENST00000554988 638 ntBASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 AC004263.2-201ENST00000617183 678 ntBASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms