Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL22A1Q8NFW1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL22A1Q8NFW1 LINC00896-202ENST00000609602 2128 ntBASIC22.56■■□□□ 1.2
COL22A1Q8NFW1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC22.56■■□□□ 1.2
COL22A1Q8NFW1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
COL22A1Q8NFW1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL22A1Q8NFW1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
COL22A1Q8NFW1 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL22A1Q8NFW1 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL22A1Q8NFW1 AC092933.1-201ENST00000393644 945 ntBASIC22.56■■□□□ 1.2
COL22A1Q8NFW1 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC22.56■■□□□ 1.2
COL22A1Q8NFW1 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC22.56■■□□□ 1.2
COL22A1Q8NFW1 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC22.56■■□□□ 1.2
COL22A1Q8NFW1 PARP8-218ENST00000513738 596 ntTSL 4 BASIC22.56■■□□□ 1.2
COL22A1Q8NFW1 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
COL22A1Q8NFW1 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC22.56■■□□□ 1.2
COL22A1Q8NFW1 MIR6787-201ENST00000616675 61 ntBASIC22.56■■□□□ 1.2
COL22A1Q8NFW1 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL22A1Q8NFW1 AC068587.10-201ENST00000641210 219 ntBASIC22.56■■□□□ 1.2
COL22A1Q8NFW1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL22A1Q8NFW1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 SLC25A1P3-201ENST00000395415 828 ntBASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 OSM-203ENST00000403463 464 ntTSL 3 BASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 RAB35-202ENST00000534951 939 ntTSL 2 BASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 REXO1L9P-201ENST00000604264 2108 ntBASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 AC133552.6-201ENST00000613406 534 ntBASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL22A1Q8NFW1 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC22.54■■□□□ 1.2
COL22A1Q8NFW1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL22A1Q8NFW1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL22A1Q8NFW1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC22.54■■□□□ 1.2
COL22A1Q8NFW1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL22A1Q8NFW1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
COL22A1Q8NFW1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC22.54■■□□□ 1.2
COL22A1Q8NFW1 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL22A1Q8NFW1 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL22A1Q8NFW1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC22.54■■□□□ 1.2
COL22A1Q8NFW1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
COL22A1Q8NFW1 MFF-223ENST00000524634 647 ntTSL 2 BASIC22.54■■□□□ 1.2
COL22A1Q8NFW1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
COL22A1Q8NFW1 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC22.54■■□□□ 1.2
COL22A1Q8NFW1 CTBP2P3-201ENST00000585629 1255 ntBASIC22.54■■□□□ 1.2
COL22A1Q8NFW1 KRT8P44-201ENST00000441609 1350 ntBASIC22.54■■□□□ 1.2
COL22A1Q8NFW1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL22A1Q8NFW1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
COL22A1Q8NFW1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 RPSAP52-203ENST00000622976 1023 ntBASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 AC098850.1-201ENST00000419919 790 ntBASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 USB1-203ENST00000539737 1212 ntTSL 2 BASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 MIR4538-201ENST00000581377 78 ntBASIC22.53■■□□□ 1.2
COL22A1Q8NFW1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 AC023310.3-201ENST00000557027 670 ntBASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 AC044860.1-202ENST00000559481 777 ntBASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 AC100756.1-201ENST00000562736 682 ntBASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 IGHV3OR16-16-201ENST00000563644 343 ntBASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 AC138749.3-201ENST00000567691 622 ntBASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 SRD5A3P1-201ENST00000603021 949 ntBASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 AC116165.1-201ENST00000611806 668 ntBASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 5S_rRNA.22-201ENST00000614916 106 ntBASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms