Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 KRT18P20-201ENST00000548986 1279 ntBASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 DUX4L2-201ENST00000561772 1275 ntBASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 CCDC92B-201ENST00000575506 885 ntBASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 AC233992.3-201ENST00000607491 485 ntBASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 AL355001.2-201ENST00000620617 1191 ntBASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 DUX4L6-201ENST00000626483 1275 ntBASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 DUX4L1-201ENST00000627662 1275 ntBASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 DUX4L8-201ENST00000629013 1275 ntBASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 DUX4L3-201ENST00000630187 1275 ntBASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 DUX4L7-201ENST00000630678 1275 ntBASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 DUX4L5-201ENST00000630834 1275 ntBASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 CICP24-201ENST00000605464 2705 ntBASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SPTSSBQ8NFR3 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 TNN-202ENST00000621086 4234 ntTSL 5 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms