Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.1■□□□□ 0.17
NUP43Q8NFH3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 AC092068.3-201ENST00000587894 2016 ntBASIC16.09■□□□□ 0.17
NUP43Q8NFH3 AC005915.1-201ENST00000624912 2018 ntBASIC16.09■□□□□ 0.17
NUP43Q8NFH3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 AC004817.3-201ENST00000602957 2129 ntBASIC16.09■□□□□ 0.17
NUP43Q8NFH3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 AC106795.1-205ENST00000512851 1056 ntBASIC16.09■□□□□ 0.17
NUP43Q8NFH3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 AC106886.4-201ENST00000623557 2502 ntBASIC16.09■□□□□ 0.17
NUP43Q8NFH3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUP43Q8NFH3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
NUP43Q8NFH3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.08■□□□□ 0.17
NUP43Q8NFH3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NUP43Q8NFH3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
NUP43Q8NFH3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.08■□□□□ 0.17
NUP43Q8NFH3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
NUP43Q8NFH3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
NUP43Q8NFH3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
NUP43Q8NFH3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 LINC00982-205ENST00000420957 435 ntBASIC16.08■□□□□ 0.16
NUP43Q8NFH3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 BX005266.1-201ENST00000473402 457 ntBASIC16.08■□□□□ 0.16
NUP43Q8NFH3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 AC091304.2-201ENST00000564639 760 ntBASIC16.08■□□□□ 0.16
NUP43Q8NFH3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 AC105020.1-201ENST00000435356 2205 ntBASIC16.08■□□□□ 0.16
NUP43Q8NFH3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NUP43Q8NFH3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUP43Q8NFH3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUP43Q8NFH3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NUP43Q8NFH3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NUP43Q8NFH3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.07■□□□□ 0.16
NUP43Q8NFH3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.07■□□□□ 0.16
NUP43Q8NFH3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.07■□□□□ 0.16
NUP43Q8NFH3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUP43Q8NFH3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUP43Q8NFH3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUP43Q8NFH3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NUP43Q8NFH3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NUP43Q8NFH3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NUP43Q8NFH3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NUP43Q8NFH3 RBM17P3-201ENST00000417687 1192 ntBASIC16.07■□□□□ 0.16
NUP43Q8NFH3 TSPY19P-201ENST00000418461 509 ntBASIC16.07■□□□□ 0.16
NUP43Q8NFH3 TSPY18P-201ENST00000441642 509 ntBASIC16.07■□□□□ 0.16
NUP43Q8NFH3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.07■□□□□ 0.16
NUP43Q8NFH3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.07■□□□□ 0.16
NUP43Q8NFH3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.07■□□□□ 0.16
NUP43Q8NFH3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms