Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF439Q8NDP4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF439Q8NDP4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF439Q8NDP4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
ZNF439Q8NDP4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.27□□□□□ -0.12
ZNF439Q8NDP4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF439Q8NDP4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
ZNF439Q8NDP4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF439Q8NDP4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF439Q8NDP4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF439Q8NDP4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF439Q8NDP4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 AC084018.2-201ENST00000613093 2607 ntBASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 MIR1224-201ENST00000408193 85 ntBASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 AC096582.2-201ENST00000510860 516 ntBASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 AC074051.2-201ENST00000565115 352 ntBASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 AC132938.5-201ENST00000624980 1813 ntBASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF439Q8NDP4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 RCN1P2-201ENST00000398357 915 ntBASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 AP000867.3-201ENST00000524675 377 ntBASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 AC012615.1-201ENST00000565797 1299 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms