Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.03■□□□□ 0.32
TMEFF1Q8IYR6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 FAM58DP-201ENST00000428076 619 ntBASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 CNN2P2-201ENST00000443536 909 ntBASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 CNN2P3-201ENST00000450201 906 ntBASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 AC069335.1-201ENST00000489972 472 ntBASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 AC190387.1-201ENST00000551683 408 ntBASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 AL136317.3-201ENST00000618497 906 ntBASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 AL645728.2-201ENST00000641974 660 ntBASIC17.02■□□□□ 0.32
TMEFF1Q8IYR6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.02■□□□□ 0.31
TMEFF1Q8IYR6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMEFF1Q8IYR6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.02■□□□□ 0.31
TMEFF1Q8IYR6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TMEFF1Q8IYR6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.02■□□□□ 0.31
TMEFF1Q8IYR6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMEFF1Q8IYR6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMEFF1Q8IYR6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMEFF1Q8IYR6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMEFF1Q8IYR6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
TMEFF1Q8IYR6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMEFF1Q8IYR6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TMEFF1Q8IYR6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TMEFF1Q8IYR6 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.02■□□□□ 0.31
TMEFF1Q8IYR6 REXO1L11P-201ENST00000620964 1927 ntBASIC17.02■□□□□ 0.31
TMEFF1Q8IYR6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEFF1Q8IYR6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms