Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ZNF440Q8IYI8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ZNF440Q8IYI8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF440Q8IYI8 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.72■□□□□ 0.11
ZNF440Q8IYI8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF440Q8IYI8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.72■□□□□ 0.11
ZNF440Q8IYI8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.72■□□□□ 0.11
ZNF440Q8IYI8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF440Q8IYI8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF440Q8IYI8 AL356309.3-201ENST00000624132 1934 ntBASIC15.72■□□□□ 0.11
ZNF440Q8IYI8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ZNF440Q8IYI8 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF440Q8IYI8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 AC022211.2-201ENST00000585075 2527 ntBASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 TSPY19P-201ENST00000418461 509 ntBASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 TSPY18P-201ENST00000441642 509 ntBASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 AC004817.3-201ENST00000602957 2129 ntBASIC15.71■□□□□ 0.11
ZNF440Q8IYI8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ZNF440Q8IYI8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
ZNF440Q8IYI8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
ZNF440Q8IYI8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
ZNF440Q8IYI8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
ZNF440Q8IYI8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ZNF440Q8IYI8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
ZNF440Q8IYI8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 AL732292.2-201ENST00000609649 430 ntBASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 AL355877.3-201ENST00000622820 899 ntBASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF440Q8IYI8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF440Q8IYI8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF440Q8IYI8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF440Q8IYI8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF440Q8IYI8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF440Q8IYI8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.69■□□□□ 0.1
ZNF440Q8IYI8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms