Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB43Q86YS6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.47■□□□□ 0.23
RAB43Q86YS6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.47■□□□□ 0.23
RAB43Q86YS6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAB43Q86YS6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB43Q86YS6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RAB43Q86YS6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB43Q86YS6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RAB43Q86YS6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
RAB43Q86YS6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
RAB43Q86YS6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB43Q86YS6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB43Q86YS6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
RAB43Q86YS6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB43Q86YS6 AL020989.1-201ENST00000422979 469 ntBASIC16.47■□□□□ 0.23
RAB43Q86YS6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.47■□□□□ 0.23
RAB43Q86YS6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.47■□□□□ 0.23
RAB43Q86YS6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RAB43Q86YS6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.47■□□□□ 0.23
RAB43Q86YS6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.47■□□□□ 0.23
RAB43Q86YS6 AL356488.2-201ENST00000602755 427 ntBASIC16.47■□□□□ 0.23
RAB43Q86YS6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.47■□□□□ 0.23
RAB43Q86YS6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB43Q86YS6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB43Q86YS6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB43Q86YS6 AC135776.1-201ENST00000319817 2481 ntBASIC16.47■□□□□ 0.23
RAB43Q86YS6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.47■□□□□ 0.23
RAB43Q86YS6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB43Q86YS6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RAB43Q86YS6 AP002414.3-201ENST00000589352 1468 ntBASIC16.47■□□□□ 0.23
RAB43Q86YS6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB43Q86YS6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAB43Q86YS6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB43Q86YS6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB43Q86YS6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB43Q86YS6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB43Q86YS6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB43Q86YS6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB43Q86YS6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB43Q86YS6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB43Q86YS6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB43Q86YS6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAB43Q86YS6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAB43Q86YS6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 KRT18P3-201ENST00000451602 1288 ntBASIC16.46■□□□□ 0.23
RAB43Q86YS6 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.46■□□□□ 0.23
RAB43Q86YS6 RNA5SP416-201ENST00000516838 111 ntBASIC16.46■□□□□ 0.23
RAB43Q86YS6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 UNC93B6-202ENST00000528242 690 ntBASIC16.46■□□□□ 0.23
RAB43Q86YS6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAB43Q86YS6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAB43Q86YS6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB43Q86YS6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAB43Q86YS6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB43Q86YS6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB43Q86YS6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB43Q86YS6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAB43Q86YS6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RAB43Q86YS6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RAB43Q86YS6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RAB43Q86YS6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RAB43Q86YS6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB43Q86YS6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB43Q86YS6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB43Q86YS6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB43Q86YS6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB43Q86YS6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RAB43Q86YS6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB43Q86YS6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB43Q86YS6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB43Q86YS6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB43Q86YS6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB43Q86YS6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB43Q86YS6 KLF4P1-201ENST00000412782 1185 ntBASIC16.45■□□□□ 0.22
RAB43Q86YS6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.45■□□□□ 0.22
RAB43Q86YS6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.45■□□□□ 0.22
RAB43Q86YS6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.45■□□□□ 0.22
RAB43Q86YS6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RAB43Q86YS6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
RAB43Q86YS6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB43Q86YS6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.45■□□□□ 0.22
RAB43Q86YS6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms