Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 AC106795.1-205ENST00000512851 1056 ntBASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD1LQ86WJ1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 PRYP5-201ENST00000451909 266 ntBASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD1LQ86WJ1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC21.2■□□□□ 0.99
CHD1LQ86WJ1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 AL732292.2-201ENST00000609649 430 ntBASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.2■□□□□ 0.98
CHD1LQ86WJ1 PCDHB19P-201ENST00000570871 2371 ntBASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 AL645728.1-201ENST00000366221 2101 ntBASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 BX005266.1-201ENST00000473402 457 ntBASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD1LQ86WJ1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms