Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTTNQ86VV8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTTNQ86VV8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RTTNQ86VV8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RTTNQ86VV8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTTNQ86VV8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTTNQ86VV8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTTNQ86VV8 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RTTNQ86VV8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTTNQ86VV8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTTNQ86VV8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTTNQ86VV8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.21■□□□□ 0.03
RTTNQ86VV8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTTNQ86VV8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RTTNQ86VV8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RTTNQ86VV8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.21■□□□□ 0.03
RTTNQ86VV8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.21■□□□□ 0.03
RTTNQ86VV8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RTTNQ86VV8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.21■□□□□ 0.03
RTTNQ86VV8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.21■□□□□ 0.03
RTTNQ86VV8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RTTNQ86VV8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.21■□□□□ 0.03
RTTNQ86VV8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
RTTNQ86VV8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RTTNQ86VV8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTTNQ86VV8 AC243591.1-201ENST00000452967 1364 ntBASIC15.21■□□□□ 0.03
RTTNQ86VV8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RTTNQ86VV8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.21■□□□□ 0.02
RTTNQ86VV8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
RTTNQ86VV8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RTTNQ86VV8 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RTTNQ86VV8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
RTTNQ86VV8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RTTNQ86VV8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.21■□□□□ 0.02
RTTNQ86VV8 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
RTTNQ86VV8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RTTNQ86VV8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RTTNQ86VV8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RTTNQ86VV8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
RTTNQ86VV8 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.2■□□□□ 0.02
RTTNQ86VV8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
RTTNQ86VV8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RTTNQ86VV8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
RTTNQ86VV8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.2■□□□□ 0.02
RTTNQ86VV8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.2■□□□□ 0.02
RTTNQ86VV8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.2■□□□□ 0.02
RTTNQ86VV8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.2■□□□□ 0.02
RTTNQ86VV8 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
RTTNQ86VV8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
RTTNQ86VV8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.2■□□□□ 0.02
RTTNQ86VV8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 AC084018.2-201ENST00000613093 2607 ntBASIC15.2■□□□□ 0.02
RTTNQ86VV8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.2■□□□□ 0.02
RTTNQ86VV8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RTTNQ86VV8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 NUS1P2-201ENST00000417358 873 ntBASIC15.2■□□□□ 0.02
RTTNQ86VV8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.2■□□□□ 0.02
RTTNQ86VV8 SAPCD2P3-201ENST00000455031 850 ntBASIC15.2■□□□□ 0.02
RTTNQ86VV8 RPL13AP23-201ENST00000480739 586 ntBASIC15.2■□□□□ 0.02
RTTNQ86VV8 RNPS1P1-201ENST00000507437 918 ntBASIC15.2■□□□□ 0.02
RTTNQ86VV8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.2■□□□□ 0.02
RTTNQ86VV8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.2■□□□□ 0.02
RTTNQ86VV8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.2■□□□□ 0.02
RTTNQ86VV8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.2■□□□□ 0.02
RTTNQ86VV8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RTTNQ86VV8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RTTNQ86VV8 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTTNQ86VV8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTTNQ86VV8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTTNQ86VV8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RTTNQ86VV8 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTTNQ86VV8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RTTNQ86VV8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RTTNQ86VV8 AC132938.5-201ENST00000624980 1813 ntBASIC15.19■□□□□ 0.02
RTTNQ86VV8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTTNQ86VV8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RTTNQ86VV8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.19■□□□□ 0.02
RTTNQ86VV8 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.19■□□□□ 0.02
RTTNQ86VV8 HLA-J-203ENST00000494367 1087 ntBASIC15.19■□□□□ 0.02
RTTNQ86VV8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.19■□□□□ 0.02
RTTNQ86VV8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms