Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PACS2Q86VP3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PACS2Q86VP3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PACS2Q86VP3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
PACS2Q86VP3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PACS2Q86VP3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PACS2Q86VP3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.35■□□□□ 0.37
PACS2Q86VP3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PACS2Q86VP3 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.35■□□□□ 0.37
PACS2Q86VP3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PACS2Q86VP3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.35■□□□□ 0.37
PACS2Q86VP3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PACS2Q86VP3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PACS2Q86VP3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PACS2Q86VP3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PACS2Q86VP3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.34■□□□□ 0.37
PACS2Q86VP3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.34■□□□□ 0.37
PACS2Q86VP3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PACS2Q86VP3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PACS2Q86VP3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PACS2Q86VP3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.34■□□□□ 0.37
PACS2Q86VP3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
PACS2Q86VP3 AC113347.1-201ENST00000413321 391 ntBASIC17.34■□□□□ 0.37
PACS2Q86VP3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PACS2Q86VP3 AC073347.1-201ENST00000421633 2643 ntBASIC17.34■□□□□ 0.37
PACS2Q86VP3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PACS2Q86VP3 AC007663.1-201ENST00000438948 1240 ntBASIC17.34■□□□□ 0.37
PACS2Q86VP3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PACS2Q86VP3 SLC25A3P1-201ENST00000443844 931 ntBASIC17.34■□□□□ 0.37
PACS2Q86VP3 ATP5G1P1-201ENST00000448724 379 ntBASIC17.34■□□□□ 0.37
PACS2Q86VP3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.34■□□□□ 0.37
PACS2Q86VP3 MYLKP1-201ENST00000509077 1580 ntBASIC17.34■□□□□ 0.37
PACS2Q86VP3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PACS2Q86VP3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PACS2Q86VP3 AC092338.2-201ENST00000568827 1415 ntBASIC17.34■□□□□ 0.37
PACS2Q86VP3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.34■□□□□ 0.37
PACS2Q86VP3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PACS2Q86VP3 AL357033.4-201ENST00000617703 1807 ntBASIC17.34■□□□□ 0.37
PACS2Q86VP3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PACS2Q86VP3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PACS2Q86VP3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.34■□□□□ 0.37
PACS2Q86VP3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PACS2Q86VP3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.34■□□□□ 0.37
PACS2Q86VP3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
PACS2Q86VP3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
PACS2Q86VP3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PACS2Q86VP3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PACS2Q86VP3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PACS2Q86VP3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PACS2Q86VP3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PACS2Q86VP3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PACS2Q86VP3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.33■□□□□ 0.37
PACS2Q86VP3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PACS2Q86VP3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PACS2Q86VP3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PACS2Q86VP3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PACS2Q86VP3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PACS2Q86VP3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PACS2Q86VP3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.33■□□□□ 0.36
PACS2Q86VP3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.33■□□□□ 0.36
PACS2Q86VP3 HMGA1P5-201ENST00000412453 271 ntBASIC17.33■□□□□ 0.36
PACS2Q86VP3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PACS2Q86VP3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
PACS2Q86VP3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PACS2Q86VP3 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC17.33■□□□□ 0.36
PACS2Q86VP3 KRT18P21-201ENST00000515767 1272 ntBASIC17.33■□□□□ 0.36
PACS2Q86VP3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
PACS2Q86VP3 AL512604.3-201ENST00000569583 964 ntBASIC17.33■□□□□ 0.36
PACS2Q86VP3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.33■□□□□ 0.36
PACS2Q86VP3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PACS2Q86VP3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.33■□□□□ 0.36
PACS2Q86VP3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PACS2Q86VP3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PACS2Q86VP3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.33■□□□□ 0.36
PACS2Q86VP3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.33■□□□□ 0.36
PACS2Q86VP3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PACS2Q86VP3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PACS2Q86VP3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PACS2Q86VP3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.33■□□□□ 0.36
PACS2Q86VP3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.33■□□□□ 0.36
PACS2Q86VP3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PACS2Q86VP3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PACS2Q86VP3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PACS2Q86VP3 AC006058.4-201ENST00000624016 1670 ntBASIC17.32■□□□□ 0.36
PACS2Q86VP3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.32■□□□□ 0.36
PACS2Q86VP3 GMCL1P1-201ENST00000463439 1581 ntBASIC17.32■□□□□ 0.36
PACS2Q86VP3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PACS2Q86VP3 AC023908.3-201ENST00000564211 3047 ntBASIC17.32■□□□□ 0.36
PACS2Q86VP3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PACS2Q86VP3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PACS2Q86VP3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PACS2Q86VP3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PACS2Q86VP3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PACS2Q86VP3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PACS2Q86VP3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.32■□□□□ 0.36
PACS2Q86VP3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PACS2Q86VP3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.32■□□□□ 0.36
PACS2Q86VP3 AC012497.1-201ENST00000429392 575 ntBASIC17.32■□□□□ 0.36
PACS2Q86VP3 FAM210CP-201ENST00000445714 574 ntBASIC17.32■□□□□ 0.36
PACS2Q86VP3 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms