Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 NKAPP1-205ENST00000585790 367 ntBASIC17.17■□□□□ 0.34
LDB1Q86U70 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LDB1Q86U70 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LDB1Q86U70 MTDHP3-201ENST00000594186 672 ntBASIC17.17■□□□□ 0.34
LDB1Q86U70 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LDB1Q86U70 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.17■□□□□ 0.34
LDB1Q86U70 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LDB1Q86U70 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.17■□□□□ 0.34
LDB1Q86U70 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LDB1Q86U70 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LDB1Q86U70 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LDB1Q86U70 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LDB1Q86U70 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.17■□□□□ 0.34
LDB1Q86U70 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LDB1Q86U70 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.16■□□□□ 0.34
LDB1Q86U70 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.16■□□□□ 0.34
LDB1Q86U70 RNF216P1-203ENST00000404404 2427 ntBASIC17.16■□□□□ 0.34
LDB1Q86U70 SIGLEC16-201ENST00000599858 1437 ntBASIC17.16■□□□□ 0.34
LDB1Q86U70 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.16■□□□□ 0.34
LDB1Q86U70 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LDB1Q86U70 AC106795.1-205ENST00000512851 1056 ntBASIC17.16■□□□□ 0.34
LDB1Q86U70 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.16■□□□□ 0.34
LDB1Q86U70 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.16■□□□□ 0.34
LDB1Q86U70 AC073592.4-201ENST00000623827 446 ntBASIC17.16■□□□□ 0.34
LDB1Q86U70 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.16■□□□□ 0.34
LDB1Q86U70 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LDB1Q86U70 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LDB1Q86U70 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.16■□□□□ 0.34
LDB1Q86U70 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.16■□□□□ 0.34
LDB1Q86U70 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.16■□□□□ 0.34
LDB1Q86U70 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB1Q86U70 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.15■□□□□ 0.34
LDB1Q86U70 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB1Q86U70 AGGF1P2-201ENST00000426656 2106 ntBASIC17.15■□□□□ 0.34
LDB1Q86U70 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LDB1Q86U70 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB1Q86U70 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB1Q86U70 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LDB1Q86U70 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.15■□□□□ 0.34
LDB1Q86U70 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB1Q86U70 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LDB1Q86U70 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LDB1Q86U70 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.15■□□□□ 0.34
LDB1Q86U70 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB1Q86U70 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB1Q86U70 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
LDB1Q86U70 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB1Q86U70 AKR1C7P-201ENST00000305623 895 ntBASIC17.15■□□□□ 0.34
LDB1Q86U70 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB1Q86U70 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB1Q86U70 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LDB1Q86U70 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LDB1Q86U70 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.15■□□□□ 0.34
LDB1Q86U70 AC064862.7-201ENST00000604520 867 ntBASIC17.15■□□□□ 0.34
LDB1Q86U70 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB1Q86U70 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB1Q86U70 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LDB1Q86U70 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LDB1Q86U70 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB1Q86U70 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB1Q86U70 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LDB1Q86U70 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
LDB1Q86U70 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
LDB1Q86U70 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.15■□□□□ 0.34
LDB1Q86U70 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
LDB1Q86U70 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
LDB1Q86U70 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
LDB1Q86U70 FLJ38576-201ENST00000623820 2459 ntBASIC17.14■□□□□ 0.34
LDB1Q86U70 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.14■□□□□ 0.34
LDB1Q86U70 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.14■□□□□ 0.34
LDB1Q86U70 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LDB1Q86U70 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LDB1Q86U70 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.14■□□□□ 0.33
LDB1Q86U70 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LDB1Q86U70 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.14■□□□□ 0.33
LDB1Q86U70 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB1Q86U70 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB1Q86U70 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LDB1Q86U70 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms