Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 PCDHB18P-201ENST00000524813 2368 ntBASIC16.49■□□□□ 0.23
RNF44Q7L0R7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 SLC25A1P3-201ENST00000395415 828 ntBASIC16.49■□□□□ 0.23
RNF44Q7L0R7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 RPS15P9-201ENST00000494093 319 ntBASIC16.49■□□□□ 0.23
RNF44Q7L0R7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RNF44Q7L0R7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 AP002414.1-201ENST00000391405 1147 ntBASIC16.48■□□□□ 0.23
RNF44Q7L0R7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 SLC25A1P1-201ENST00000528351 927 ntBASIC16.48■□□□□ 0.23
RNF44Q7L0R7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 AC145285.3-201ENST00000564603 959 ntBASIC16.48■□□□□ 0.23
RNF44Q7L0R7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 AC116353.5-201ENST00000638148 1699 ntBASIC16.48■□□□□ 0.23
RNF44Q7L0R7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RNF44Q7L0R7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 AL022342.1-201ENST00000400363 863 ntBASIC16.47■□□□□ 0.23
RNF44Q7L0R7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 RNA5SP415-201ENST00000517246 115 ntBASIC16.47■□□□□ 0.23
RNF44Q7L0R7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF44Q7L0R7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms