Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 AC116407.4-201ENST00000623319 1061 ntBASIC15.92■□□□□ 0.14
TUBA1AQ71U36 Z83836.1-201ENST00000624605 1642 ntBASIC15.92■□□□□ 0.14
TUBA1AQ71U36 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 AL513523.2-202ENST00000427283 2040 ntBASIC15.92■□□□□ 0.14
TUBA1AQ71U36 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 UPK3BP1-201ENST00000428678 509 ntBASIC15.91■□□□□ 0.14
TUBA1AQ71U36 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 DUTP2-201ENST00000519164 463 ntBASIC15.91■□□□□ 0.14
TUBA1AQ71U36 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 AC005332.3-201ENST00000589904 676 ntBASIC15.91■□□□□ 0.14
TUBA1AQ71U36 AC011498.5-201ENST00000592027 486 ntBASIC15.91■□□□□ 0.14
TUBA1AQ71U36 LINC01451-201ENST00000623792 534 ntBASIC15.91■□□□□ 0.14
TUBA1AQ71U36 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TUBA1AQ71U36 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 AC091076.1-201ENST00000610741 619 ntBASIC15.9■□□□□ 0.14
TUBA1AQ71U36 AC004263.2-201ENST00000617183 678 ntBASIC15.9■□□□□ 0.14
TUBA1AQ71U36 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.9■□□□□ 0.14
TUBA1AQ71U36 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TUBA1AQ71U36 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.89■□□□□ 0.13
TUBA1AQ71U36 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.89■□□□□ 0.13
TUBA1AQ71U36 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBA1AQ71U36 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TUBA1AQ71U36 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBA1AQ71U36 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.89■□□□□ 0.13
TUBA1AQ71U36 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.89■□□□□ 0.13
TUBA1AQ71U36 AC007950.2-201ENST00000615045 2347 ntBASIC15.89■□□□□ 0.13
TUBA1AQ71U36 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms