Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 MIR3652-201ENST00000579335 131 ntBASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 OR6D1P-203ENST00000641209 4860 ntBASIC17.07■□□□□ 0.32
ZNF549Q6P9A3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 AC097637.2-201ENST00000624096 1997 ntBASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 FLJ38576-201ENST00000623820 2459 ntBASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 AC106795.1-205ENST00000512851 1056 ntBASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF549Q6P9A3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 GPR89P-201ENST00000407924 1495 ntBASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 RNF216P1-203ENST00000404404 2427 ntBASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 ACTG1P4-201ENST00000425123 1122 ntBASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF549Q6P9A3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
ZNF549Q6P9A3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZNF549Q6P9A3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF549Q6P9A3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF549Q6P9A3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms