Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC25.65■■□□□ 1.7
CDC42BPAQ5VT25 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDC42BPAQ5VT25 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDC42BPAQ5VT25 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC25.64■■□□□ 1.7
CDC42BPAQ5VT25 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDC42BPAQ5VT25 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
CDC42BPAQ5VT25 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC25.64■■□□□ 1.7
CDC42BPAQ5VT25 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC25.64■■□□□ 1.7
CDC42BPAQ5VT25 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC25.64■■□□□ 1.7
CDC42BPAQ5VT25 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC25.64■■□□□ 1.7
CDC42BPAQ5VT25 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
CDC42BPAQ5VT25 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC25.64■■□□□ 1.7
CDC42BPAQ5VT25 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC25.64■■□□□ 1.7
CDC42BPAQ5VT25 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC25.64■■□□□ 1.7
CDC42BPAQ5VT25 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC25.64■■□□□ 1.7
CDC42BPAQ5VT25 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC25.64■■□□□ 1.7
CDC42BPAQ5VT25 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
CDC42BPAQ5VT25 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CDC42BPAQ5VT25 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CDC42BPAQ5VT25 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CDC42BPAQ5VT25 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC25.64■■□□□ 1.69
CDC42BPAQ5VT25 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 AC009118.2-201ENST00000613275 655 ntBASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 EDF1-203ENST00000371649 790 ntTSL 2 BASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 TEX28P1-201ENST00000613479 1221 ntBASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 TEX28P2-201ENST00000617764 1221 ntBASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 TPR-209ENST00000613151 2478 ntTSL 5 BASIC25.63■■□□□ 1.69
CDC42BPAQ5VT25 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDC42BPAQ5VT25 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC25.62■■□□□ 1.69
CDC42BPAQ5VT25 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
CDC42BPAQ5VT25 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDC42BPAQ5VT25 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC25.62■■□□□ 1.69
CDC42BPAQ5VT25 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CDC42BPAQ5VT25 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CDC42BPAQ5VT25 AC135050.7-201ENST00000624508 2218 ntBASIC25.62■■□□□ 1.69
CDC42BPAQ5VT25 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDC42BPAQ5VT25 AC008764.6-201ENST00000595909 2069 ntBASIC25.62■■□□□ 1.69
CDC42BPAQ5VT25 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
CDC42BPAQ5VT25 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDC42BPAQ5VT25 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CDC42BPAQ5VT25 AC244107.1-201ENST00000442033 332 ntBASIC25.62■■□□□ 1.69
CDC42BPAQ5VT25 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC25.62■■□□□ 1.69
CDC42BPAQ5VT25 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDC42BPAQ5VT25 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC25.62■■□□□ 1.69
CDC42BPAQ5VT25 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 WASH4P-201ENST00000564273 1246 ntBASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 SLC9A3P2-201ENST00000447821 2021 ntBASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42BPAQ5VT25 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC25.6■■□□□ 1.69
CDC42BPAQ5VT25 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms