Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
RC3H1Q5TC82 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RC3H1Q5TC82 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RC3H1Q5TC82 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.39■■□□□ 1.02
RC3H1Q5TC82 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RC3H1Q5TC82 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RC3H1Q5TC82 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
RC3H1Q5TC82 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.39■■□□□ 1.02
RC3H1Q5TC82 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.39■■□□□ 1.01
RC3H1Q5TC82 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RC3H1Q5TC82 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.39■■□□□ 1.01
RC3H1Q5TC82 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC21.39■■□□□ 1.01
RC3H1Q5TC82 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RC3H1Q5TC82 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RC3H1Q5TC82 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC21.39■■□□□ 1.01
RC3H1Q5TC82 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC21.39■■□□□ 1.01
RC3H1Q5TC82 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RC3H1Q5TC82 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC21.39■■□□□ 1.01
RC3H1Q5TC82 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC21.39■■□□□ 1.01
RC3H1Q5TC82 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
RC3H1Q5TC82 AC021097.1-201ENST00000607902 574 ntBASIC21.39■■□□□ 1.01
RC3H1Q5TC82 AC003101.2-201ENST00000612557 442 ntBASIC21.39■■□□□ 1.01
RC3H1Q5TC82 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RC3H1Q5TC82 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
RC3H1Q5TC82 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RC3H1Q5TC82 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.39■■□□□ 1.01
RC3H1Q5TC82 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
RC3H1Q5TC82 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.39■■□□□ 1.01
RC3H1Q5TC82 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 CU639417.3-201ENST00000624240 1404 ntBASIC21.38■■□□□ 1.01
RC3H1Q5TC82 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 HNRNPA3P1-201ENST00000401429 1139 ntBASIC21.38■■□□□ 1.01
RC3H1Q5TC82 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 HNRNPA3P5-201ENST00000455201 833 ntBASIC21.38■■□□□ 1.01
RC3H1Q5TC82 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 MIR6752-201ENST00000618442 71 ntBASIC21.38■■□□□ 1.01
RC3H1Q5TC82 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 TNXA-203ENST00000507684 2038 ntBASIC21.38■■□□□ 1.01
RC3H1Q5TC82 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.38■■□□□ 1.01
RC3H1Q5TC82 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RC3H1Q5TC82 AC120498.9-201ENST00000339021 3867 ntBASIC21.37■■□□□ 1.01
RC3H1Q5TC82 LINC00895-201ENST00000629028 1637 ntBASIC21.37■■□□□ 1.01
RC3H1Q5TC82 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RC3H1Q5TC82 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RC3H1Q5TC82 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RC3H1Q5TC82 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RC3H1Q5TC82 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RC3H1Q5TC82 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RC3H1Q5TC82 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RC3H1Q5TC82 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RC3H1Q5TC82 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC21.37■■□□□ 1.01
RC3H1Q5TC82 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RC3H1Q5TC82 NAA50-208ENST00000497255 789 ntTSL 5 BASIC21.37■■□□□ 1.01
RC3H1Q5TC82 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.37■■□□□ 1.01
RC3H1Q5TC82 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC21.37■■□□□ 1.01
RC3H1Q5TC82 MIR4492-201ENST00000581627 80 ntBASIC21.37■■□□□ 1.01
RC3H1Q5TC82 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.37■■□□□ 1.01
RC3H1Q5TC82 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RC3H1Q5TC82 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.37■■□□□ 1.01
RC3H1Q5TC82 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RC3H1Q5TC82 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.37■■□□□ 1.01
RC3H1Q5TC82 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
RC3H1Q5TC82 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 TMPRSS11CP-201ENST00000453277 683 ntBASIC21.36■■□□□ 1.01
RC3H1Q5TC82 TP53TG3HP-202ENST00000569755 579 ntBASIC21.36■■□□□ 1.01
RC3H1Q5TC82 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 AC133963.1-201ENST00000504166 1679 ntBASIC21.36■■□□□ 1.01
RC3H1Q5TC82 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms