Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01559Q495D7 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC12.95□□□□□ -0.34
LINC01559Q495D7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC01559Q495D7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC01559Q495D7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC01559Q495D7 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC01559Q495D7 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.95□□□□□ -0.34
LINC01559Q495D7 AL021368.1-201ENST00000607490 540 ntBASIC12.95□□□□□ -0.34
LINC01559Q495D7 AC106795.5-201ENST00000623288 454 ntBASIC12.95□□□□□ -0.34
LINC01559Q495D7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01559Q495D7 AC093525.9-201ENST00000624961 1746 ntBASIC12.95□□□□□ -0.34
LINC01559Q495D7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC01559Q495D7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
LINC01559Q495D7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01559Q495D7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01559Q495D7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LINC01559Q495D7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC01559Q495D7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01559Q495D7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC01559Q495D7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
LINC01559Q495D7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01559Q495D7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LINC01559Q495D7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01559Q495D7 AC106872.6-201ENST00000514228 1346 ntBASIC12.94□□□□□ -0.34
LINC01559Q495D7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01559Q495D7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LINC01559Q495D7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LINC01559Q495D7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC01559Q495D7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC01559Q495D7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01559Q495D7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC01559Q495D7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
LINC01559Q495D7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
LINC01559Q495D7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 GCSHP5-201ENST00000443090 522 ntBASIC12.94□□□□□ -0.34
LINC01559Q495D7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC01559Q495D7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
LINC01559Q495D7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01559Q495D7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 AC112220.4-201ENST00000604982 1263 ntBASIC12.94□□□□□ -0.34
LINC01559Q495D7 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LINC01559Q495D7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
LINC01559Q495D7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
LINC01559Q495D7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
LINC01559Q495D7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01559Q495D7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
LINC01559Q495D7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01559Q495D7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LINC01559Q495D7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01559Q495D7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC01559Q495D7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01559Q495D7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC01559Q495D7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01559Q495D7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01559Q495D7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01559Q495D7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01559Q495D7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC01559Q495D7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01559Q495D7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC01559Q495D7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC01559Q495D7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LINC01559Q495D7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC01559Q495D7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01559Q495D7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01559Q495D7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01559Q495D7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01559Q495D7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12.93□□□□□ -0.34
LINC01559Q495D7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01559Q495D7 SLC25A1P3-201ENST00000395415 828 ntBASIC12.93□□□□□ -0.34
LINC01559Q495D7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms