Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH17Q12864 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH17Q12864 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.37■□□□□ 0.37
CDH17Q12864 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH17Q12864 AC084018.2-201ENST00000613093 2607 ntBASIC17.37■□□□□ 0.37
CDH17Q12864 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH17Q12864 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH17Q12864 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH17Q12864 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH17Q12864 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH17Q12864 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 AC099398.1-201ENST00000567919 2776 ntBASIC17.36■□□□□ 0.37
CDH17Q12864 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH17Q12864 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH17Q12864 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CDH17Q12864 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH17Q12864 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDH17Q12864 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.36■□□□□ 0.37
CDH17Q12864 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.36■□□□□ 0.37
CDH17Q12864 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.36■□□□□ 0.37
CDH17Q12864 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH17Q12864 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH17Q12864 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDH17Q12864 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 AGGF1P2-201ENST00000426656 2106 ntBASIC17.36■□□□□ 0.37
CDH17Q12864 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH17Q12864 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH17Q12864 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CDH17Q12864 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH17Q12864 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH17Q12864 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH17Q12864 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH17Q12864 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH17Q12864 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH17Q12864 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CDH17Q12864 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH17Q12864 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH17Q12864 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH17Q12864 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH17Q12864 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH17Q12864 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CDH17Q12864 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH17Q12864 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH17Q12864 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH17Q12864 RBM17P3-201ENST00000417687 1192 ntBASIC17.35■□□□□ 0.37
CDH17Q12864 LINC00982-205ENST00000420957 435 ntBASIC17.35■□□□□ 0.37
CDH17Q12864 PRYP5-201ENST00000451909 266 ntBASIC17.35■□□□□ 0.37
CDH17Q12864 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.35■□□□□ 0.37
CDH17Q12864 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CDH17Q12864 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH17Q12864 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH17Q12864 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH17Q12864 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH17Q12864 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH17Q12864 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH17Q12864 AL121772.3-201ENST00000610840 674 ntBASIC17.35■□□□□ 0.37
CDH17Q12864 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.35■□□□□ 0.37
CDH17Q12864 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDH17Q12864 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH17Q12864 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH17Q12864 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH17Q12864 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.35■□□□□ 0.37
CDH17Q12864 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CDH17Q12864 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH17Q12864 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH17Q12864 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH17Q12864 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH17Q12864 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH17Q12864 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH17Q12864 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
CDH17Q12864 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH17Q12864 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH17Q12864 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH17Q12864 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH17Q12864 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDH17Q12864 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDH17Q12864 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH17Q12864 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CDH17Q12864 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH17Q12864 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH17Q12864 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH17Q12864 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms