Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC006011.2-201ENST00000621313 1158 ntBASIC13.23□□□□□ -0.29
HIST1H1AQ02539 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 AC007326.2-201ENST00000624224 7579 ntBASIC13.22□□□□□ -0.29
HIST1H1AQ02539 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 MTCL1P1-201ENST00000446207 792 ntBASIC13.22□□□□□ -0.29
HIST1H1AQ02539 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 AC005332.3-201ENST00000589904 676 ntBASIC13.22□□□□□ -0.29
HIST1H1AQ02539 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 AC016396.2-201ENST00000562575 1417 ntBASIC13.22□□□□□ -0.29
HIST1H1AQ02539 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H1AQ02539 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 Z83836.1-201ENST00000624605 1642 ntBASIC13.21□□□□□ -0.29
HIST1H1AQ02539 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H1AQ02539 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HIST1H1AQ02539 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.21□□□□□ -0.3
HIST1H1AQ02539 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HIST1H1AQ02539 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HIST1H1AQ02539 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HIST1H1AQ02539 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
HIST1H1AQ02539 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HIST1H1AQ02539 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HIST1H1AQ02539 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HIST1H1AQ02539 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HIST1H1AQ02539 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H1AQ02539 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H1AQ02539 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms