Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S1P61966 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S1P61966 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S1P61966 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.28■□□□□ 0.36
AP1S1P61966 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
AP1S1P61966 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
AP1S1P61966 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
AP1S1P61966 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S1P61966 ZNF259P1-201ENST00000407656 1365 ntBASIC17.28■□□□□ 0.36
AP1S1P61966 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S1P61966 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S1P61966 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S1P61966 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
AP1S1P61966 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S1P61966 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.27■□□□□ 0.36
AP1S1P61966 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S1P61966 FRMD8P1-201ENST00000440433 1524 ntBASIC17.27■□□□□ 0.36
AP1S1P61966 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
AP1S1P61966 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S1P61966 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
AP1S1P61966 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.27■□□□□ 0.36
AP1S1P61966 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S1P61966 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S1P61966 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S1P61966 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S1P61966 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S1P61966 AL022342.1-201ENST00000400363 863 ntBASIC17.27■□□□□ 0.36
AP1S1P61966 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.27■□□□□ 0.36
AP1S1P61966 AC087163.2-201ENST00000457299 853 ntBASIC17.27■□□□□ 0.36
AP1S1P61966 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S1P61966 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.27■□□□□ 0.36
AP1S1P61966 SLC25A1P1-201ENST00000528351 927 ntBASIC17.27■□□□□ 0.36
AP1S1P61966 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.27■□□□□ 0.36
AP1S1P61966 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.27■□□□□ 0.36
AP1S1P61966 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.27■□□□□ 0.36
AP1S1P61966 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S1P61966 AC010654.1-201ENST00000615722 808 ntBASIC17.27■□□□□ 0.36
AP1S1P61966 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
AP1S1P61966 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.27■□□□□ 0.35
AP1S1P61966 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP1S1P61966 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
AP1S1P61966 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
AP1S1P61966 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
AP1S1P61966 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.27■□□□□ 0.35
AP1S1P61966 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
AP1S1P61966 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S1P61966 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S1P61966 AC108860.2-201ENST00000562760 2183 ntBASIC17.26■□□□□ 0.35
AP1S1P61966 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S1P61966 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S1P61966 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S1P61966 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
AP1S1P61966 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.26■□□□□ 0.35
AP1S1P61966 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
AP1S1P61966 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S1P61966 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S1P61966 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
AP1S1P61966 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
AP1S1P61966 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
AP1S1P61966 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.26■□□□□ 0.35
AP1S1P61966 AC034105.1-201ENST00000563488 319 ntBASIC17.26■□□□□ 0.35
AP1S1P61966 AC106730.1-201ENST00000566722 1090 ntBASIC17.26■□□□□ 0.35
AP1S1P61966 MIR4751-201ENST00000578027 74 ntBASIC17.26■□□□□ 0.35
AP1S1P61966 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
AP1S1P61966 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S1P61966 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.26■□□□□ 0.35
AP1S1P61966 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.26■□□□□ 0.35
AP1S1P61966 AC004790.2-201ENST00000623588 572 ntBASIC17.26■□□□□ 0.35
AP1S1P61966 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.26■□□□□ 0.35
AP1S1P61966 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S1P61966 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S1P61966 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S1P61966 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.26■□□□□ 0.35
AP1S1P61966 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
AP1S1P61966 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
AP1S1P61966 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.26■□□□□ 0.35
AP1S1P61966 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.26■□□□□ 0.35
AP1S1P61966 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.26■□□□□ 0.35
AP1S1P61966 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.26■□□□□ 0.35
AP1S1P61966 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
AP1S1P61966 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
AP1S1P61966 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S1P61966 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
AP1S1P61966 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
AP1S1P61966 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.25■□□□□ 0.35
AP1S1P61966 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.25■□□□□ 0.35
AP1S1P61966 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms