Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 PPOX-219ENST00000544598 813 ntTSL 2 BASIC12.29□□□□□ -0.44
UBE2D3P61077 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.29□□□□□ -0.44
UBE2D3P61077 LINC01238-205ENST00000567549 1107 ntBASIC12.29□□□□□ -0.44
UBE2D3P61077 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
UBE2D3P61077 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.29□□□□□ -0.44
UBE2D3P61077 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.29□□□□□ -0.44
UBE2D3P61077 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.29□□□□□ -0.44
UBE2D3P61077 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.29□□□□□ -0.44
UBE2D3P61077 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
UBE2D3P61077 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC12.29□□□□□ -0.44
UBE2D3P61077 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
UBE2D3P61077 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC12.29□□□□□ -0.44
UBE2D3P61077 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D3P61077 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D3P61077 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.28□□□□□ -0.44
UBE2D3P61077 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.28□□□□□ -0.44
UBE2D3P61077 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
UBE2D3P61077 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D3P61077 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
UBE2D3P61077 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
UBE2D3P61077 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
UBE2D3P61077 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC12.28□□□□□ -0.44
UBE2D3P61077 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
UBE2D3P61077 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D3P61077 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC12.28□□□□□ -0.44
UBE2D3P61077 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D3P61077 AL645929.1-201ENST00000420084 975 ntBASIC12.28□□□□□ -0.44
UBE2D3P61077 AL671277.2-201ENST00000458060 996 ntBASIC12.28□□□□□ -0.44
UBE2D3P61077 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
UBE2D3P61077 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.28□□□□□ -0.44
UBE2D3P61077 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D3P61077 RBM42-202ENST00000586618 771 ntTSL 3 BASIC12.28□□□□□ -0.44
UBE2D3P61077 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.28□□□□□ -0.44
UBE2D3P61077 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC12.28□□□□□ -0.44
UBE2D3P61077 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.28□□□□□ -0.44
UBE2D3P61077 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D3P61077 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
UBE2D3P61077 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D3P61077 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D3P61077 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D3P61077 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D3P61077 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D3P61077 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
UBE2D3P61077 AC022188.1-201ENST00000620960 1664 ntBASIC12.28□□□□□ -0.44
UBE2D3P61077 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D3P61077 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
UBE2D3P61077 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D3P61077 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.28□□□□□ -0.44
UBE2D3P61077 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D3P61077 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
UBE2D3P61077 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D3P61077 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D3P61077 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D3P61077 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D3P61077 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC12.27□□□□□ -0.44
UBE2D3P61077 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2D3P61077 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2D3P61077 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2D3P61077 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2D3P61077 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2D3P61077 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2D3P61077 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2D3P61077 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2D3P61077 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2D3P61077 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
UBE2D3P61077 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2D3P61077 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.27□□□□□ -0.44
UBE2D3P61077 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2D3P61077 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.27□□□□□ -0.44
UBE2D3P61077 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
UBE2D3P61077 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D3P61077 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D3P61077 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D3P61077 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D3P61077 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D3P61077 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D3P61077 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D3P61077 AC007967.3-201ENST00000434308 558 ntBASIC12.27□□□□□ -0.45
UBE2D3P61077 AC104076.2-201ENST00000448912 469 ntBASIC12.27□□□□□ -0.45
UBE2D3P61077 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC12.27□□□□□ -0.45
UBE2D3P61077 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.45
UBE2D3P61077 AC022616.7-201ENST00000525383 220 ntBASIC12.27□□□□□ -0.45
UBE2D3P61077 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
UBE2D3P61077 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.27□□□□□ -0.45
UBE2D3P61077 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.27□□□□□ -0.45
UBE2D3P61077 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D3P61077 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
UBE2D3P61077 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D3P61077 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
UBE2D3P61077 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
UBE2D3P61077 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms