Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.7■□□□□ 0.1
CXCR4P61073 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.7■□□□□ 0.1
CXCR4P61073 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CXCR4P61073 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CXCR4P61073 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 EGFEM1P-202ENST00000431685 1563 ntBASIC15.7■□□□□ 0.1
CXCR4P61073 AC006538.1-201ENST00000567905 1585 ntBASIC15.7■□□□□ 0.1
CXCR4P61073 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CXCR4P61073 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.7■□□□□ 0.1
CXCR4P61073 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
CXCR4P61073 PAUPAR-201ENST00000630360 2965 ntBASIC15.69■□□□□ 0.1
CXCR4P61073 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CXCR4P61073 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCR4P61073 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCR4P61073 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CXCR4P61073 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCR4P61073 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.69■□□□□ 0.1
CXCR4P61073 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCR4P61073 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.69■□□□□ 0.1
CXCR4P61073 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.69■□□□□ 0.1
CXCR4P61073 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CXCR4P61073 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.69■□□□□ 0.1
CXCR4P61073 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CXCR4P61073 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CXCR4P61073 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CXCR4P61073 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CXCR4P61073 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.69■□□□□ 0.1
CXCR4P61073 AC034232.1-201ENST00000506026 1064 ntBASIC15.69■□□□□ 0.1
CXCR4P61073 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.69■□□□□ 0.1
CXCR4P61073 MIR4497-201ENST00000583208 89 ntBASIC15.69■□□□□ 0.1
CXCR4P61073 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCR4P61073 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCR4P61073 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCR4P61073 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CXCR4P61073 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCR4P61073 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCR4P61073 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CXCR4P61073 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCR4P61073 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CXCR4P61073 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCR4P61073 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCR4P61073 AC092384.3-202ENST00000564646 2873 ntBASIC15.69■□□□□ 0.1
CXCR4P61073 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CXCR4P61073 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.68■□□□□ 0.1
CXCR4P61073 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
CXCR4P61073 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.68■□□□□ 0.1
CXCR4P61073 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCR4P61073 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CXCR4P61073 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.68■□□□□ 0.1
CXCR4P61073 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCR4P61073 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CXCR4P61073 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CXCR4P61073 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCR4P61073 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCR4P61073 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCR4P61073 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CXCR4P61073 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.68■□□□□ 0.1
CXCR4P61073 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCR4P61073 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.68■□□□□ 0.1
CXCR4P61073 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCR4P61073 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CXCR4P61073 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.68■□□□□ 0.1
CXCR4P61073 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.68■□□□□ 0.1
CXCR4P61073 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.68■□□□□ 0.1
CXCR4P61073 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.68■□□□□ 0.1
CXCR4P61073 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.68■□□□□ 0.1
CXCR4P61073 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CXCR4P61073 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CXCR4P61073 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.68■□□□□ 0.1
CXCR4P61073 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.68■□□□□ 0.1
CXCR4P61073 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CXCR4P61073 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCR4P61073 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CXCR4P61073 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CXCR4P61073 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CXCR4P61073 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.68■□□□□ 0.1
CXCR4P61073 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCR4P61073 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.68■□□□□ 0.1
CXCR4P61073 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCR4P61073 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCR4P61073 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CXCR4P61073 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CXCR4P61073 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.67■□□□□ 0.1
CXCR4P61073 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.67■□□□□ 0.1
CXCR4P61073 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCR4P61073 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCR4P61073 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.67■□□□□ 0.1
CXCR4P61073 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.67■□□□□ 0.1
CXCR4P61073 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CXCR4P61073 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms