Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN2P57739 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN2P57739 AC092902.6-201ENST00000641783 218 ntBASIC16.92■□□□□ 0.3
CLDN2P57739 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CLDN2P57739 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN2P57739 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN2P57739 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
CLDN2P57739 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN2P57739 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN2P57739 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN2P57739 AC129492.6-201ENST00000611383 1305 ntBASIC16.92■□□□□ 0.3
CLDN2P57739 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN2P57739 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
CLDN2P57739 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN2P57739 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN2P57739 AC134043.2-201ENST00000624206 2238 ntBASIC16.92■□□□□ 0.3
CLDN2P57739 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN2P57739 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN2P57739 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN2P57739 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN2P57739 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CLDN2P57739 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN2P57739 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN2P57739 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN2P57739 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN2P57739 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN2P57739 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN2P57739 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN2P57739 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN2P57739 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN2P57739 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN2P57739 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN2P57739 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN2P57739 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.91■□□□□ 0.3
CLDN2P57739 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.91■□□□□ 0.3
CLDN2P57739 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.91■□□□□ 0.3
CLDN2P57739 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.91■□□□□ 0.3
CLDN2P57739 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CLDN2P57739 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN2P57739 AC107918.2-201ENST00000530817 355 ntBASIC16.91■□□□□ 0.3
CLDN2P57739 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.91■□□□□ 0.3
CLDN2P57739 AP002472.1-201ENST00000577490 586 ntBASIC16.91■□□□□ 0.3
CLDN2P57739 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN2P57739 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CLDN2P57739 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN2P57739 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CLDN2P57739 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN2P57739 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN2P57739 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN2P57739 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN2P57739 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CLDN2P57739 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN2P57739 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.91■□□□□ 0.3
CLDN2P57739 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN2P57739 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CLDN2P57739 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 NOC2LP2-201ENST00000407594 1944 ntBASIC16.9■□□□□ 0.3
CLDN2P57739 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 AC090340.1-201ENST00000620778 4980 ntBASIC16.9■□□□□ 0.3
CLDN2P57739 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.9■□□□□ 0.3
CLDN2P57739 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.9■□□□□ 0.3
CLDN2P57739 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.9■□□□□ 0.3
CLDN2P57739 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.9■□□□□ 0.3
CLDN2P57739 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN2P57739 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CLDN2P57739 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CLDN2P57739 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CLDN2P57739 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
CLDN2P57739 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.9■□□□□ 0.3
CLDN2P57739 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN2P57739 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLDN2P57739 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLDN2P57739 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN2P57739 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN2P57739 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN2P57739 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN2P57739 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CLDN2P57739 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN2P57739 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.89■□□□□ 0.29
CLDN2P57739 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CLDN2P57739 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN2P57739 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms