Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
LIMK2P53671 RCN1P2-201ENST00000398357 915 ntBASIC17.35■□□□□ 0.37
LIMK2P53671 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.35■□□□□ 0.37
LIMK2P53671 AC132008.2-207ENST00000454517 770 ntBASIC17.35■□□□□ 0.37
LIMK2P53671 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.35■□□□□ 0.37
LIMK2P53671 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.35■□□□□ 0.37
LIMK2P53671 AC009533.2-201ENST00000543664 586 ntBASIC17.35■□□□□ 0.37
LIMK2P53671 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.35■□□□□ 0.37
LIMK2P53671 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.35■□□□□ 0.37
LIMK2P53671 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.35■□□□□ 0.37
LIMK2P53671 TP73-AS1-207ENST00000624167 988 ntBASIC17.35■□□□□ 0.37
LIMK2P53671 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LIMK2P53671 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK2P53671 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK2P53671 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LIMK2P53671 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK2P53671 TP73-AS1-210ENST00000637775 1455 ntBASIC17.35■□□□□ 0.37
LIMK2P53671 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK2P53671 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK2P53671 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.35■□□□□ 0.37
LIMK2P53671 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK2P53671 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK2P53671 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LIMK2P53671 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK2P53671 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.35■□□□□ 0.37
LIMK2P53671 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK2P53671 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK2P53671 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK2P53671 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK2P53671 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LIMK2P53671 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK2P53671 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK2P53671 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK2P53671 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK2P53671 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK2P53671 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK2P53671 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK2P53671 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK2P53671 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK2P53671 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK2P53671 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK2P53671 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK2P53671 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LIMK2P53671 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.34■□□□□ 0.37
LIMK2P53671 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK2P53671 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.34■□□□□ 0.37
LIMK2P53671 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.34■□□□□ 0.37
LIMK2P53671 FAM197Y8-203ENST00000450145 560 ntBASIC17.34■□□□□ 0.37
LIMK2P53671 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.34■□□□□ 0.37
LIMK2P53671 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.34■□□□□ 0.37
LIMK2P53671 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK2P53671 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LIMK2P53671 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.34■□□□□ 0.37
LIMK2P53671 FLJ38576-201ENST00000623820 2459 ntBASIC17.34■□□□□ 0.37
LIMK2P53671 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LIMK2P53671 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK2P53671 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK2P53671 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK2P53671 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
LIMK2P53671 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LIMK2P53671 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.34■□□□□ 0.37
LIMK2P53671 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LIMK2P53671 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LIMK2P53671 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LIMK2P53671 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.33■□□□□ 0.37
LIMK2P53671 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LIMK2P53671 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.33■□□□□ 0.37
LIMK2P53671 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.33■□□□□ 0.37
LIMK2P53671 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LIMK2P53671 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LIMK2P53671 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.33■□□□□ 0.36
LIMK2P53671 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LIMK2P53671 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
LIMK2P53671 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.33■□□□□ 0.36
LIMK2P53671 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LIMK2P53671 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.33■□□□□ 0.36
LIMK2P53671 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LIMK2P53671 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.33■□□□□ 0.36
LIMK2P53671 FAM220CP-201ENST00000395253 831 ntBASIC17.33■□□□□ 0.36
LIMK2P53671 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.33■□□□□ 0.36
LIMK2P53671 AC103564.2-201ENST00000432853 1299 ntBASIC17.33■□□□□ 0.36
LIMK2P53671 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LIMK2P53671 AC124947.2-201ENST00000547118 1133 ntBASIC17.33■□□□□ 0.36
LIMK2P53671 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.33■□□□□ 0.36
LIMK2P53671 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LIMK2P53671 AL773604.1-201ENST00000617417 272 ntBASIC17.33■□□□□ 0.36
LIMK2P53671 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LIMK2P53671 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LIMK2P53671 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LIMK2P53671 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LIMK2P53671 PKD1P1-201ENST00000458669 6805 ntBASIC17.33■□□□□ 0.36
LIMK2P53671 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LIMK2P53671 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LIMK2P53671 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.33■□□□□ 0.36
LIMK2P53671 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LIMK2P53671 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LIMK2P53671 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.32■□□□□ 0.36
LIMK2P53671 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LIMK2P53671 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LIMK2P53671 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms