Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCNKBP51801 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.27■□□□□ 0.52
CLCNKBP51801 AC254562.1-201ENST00000417586 456 ntBASIC18.27■□□□□ 0.52
CLCNKBP51801 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCNKBP51801 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.27■□□□□ 0.52
CLCNKBP51801 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCNKBP51801 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.27■□□□□ 0.52
CLCNKBP51801 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCNKBP51801 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.27■□□□□ 0.52
CLCNKBP51801 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCNKBP51801 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCNKBP51801 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCNKBP51801 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.27■□□□□ 0.51
CLCNKBP51801 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.27■□□□□ 0.51
CLCNKBP51801 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.27■□□□□ 0.51
CLCNKBP51801 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKBP51801 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKBP51801 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CLCNKBP51801 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKBP51801 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKBP51801 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCNKBP51801 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKBP51801 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
CLCNKBP51801 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKBP51801 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKBP51801 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCNKBP51801 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKBP51801 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKBP51801 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.26■□□□□ 0.51
CLCNKBP51801 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKBP51801 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CLCNKBP51801 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.26■□□□□ 0.51
CLCNKBP51801 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.26■□□□□ 0.51
CLCNKBP51801 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.26■□□□□ 0.51
CLCNKBP51801 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
CLCNKBP51801 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.26■□□□□ 0.51
CLCNKBP51801 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.26■□□□□ 0.51
CLCNKBP51801 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCNKBP51801 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKBP51801 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKBP51801 CROCCP2-202ENST00000412962 2773 ntBASIC18.26■□□□□ 0.51
CLCNKBP51801 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCNKBP51801 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKBP51801 HCG11-201ENST00000411553 5696 ntBASIC18.26■□□□□ 0.51
CLCNKBP51801 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.26■□□□□ 0.51
CLCNKBP51801 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CLCNKBP51801 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CLCNKBP51801 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKBP51801 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CLCNKBP51801 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKBP51801 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCNKBP51801 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKBP51801 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKBP51801 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKBP51801 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCNKBP51801 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKBP51801 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CLCNKBP51801 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKBP51801 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CLCNKBP51801 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKBP51801 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKBP51801 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKBP51801 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKBP51801 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKBP51801 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKBP51801 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKBP51801 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.25■□□□□ 0.51
CLCNKBP51801 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.25■□□□□ 0.51
CLCNKBP51801 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.25■□□□□ 0.51
CLCNKBP51801 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCNKBP51801 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKBP51801 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLCNKBP51801 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKBP51801 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKBP51801 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLCNKBP51801 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLCNKBP51801 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCNKBP51801 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCNKBP51801 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKBP51801 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CLCNKBP51801 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKBP51801 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKBP51801 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.24■□□□□ 0.51
CLCNKBP51801 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.24■□□□□ 0.51
CLCNKBP51801 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKBP51801 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKBP51801 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.24■□□□□ 0.51
CLCNKBP51801 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKBP51801 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKBP51801 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.24■□□□□ 0.51
CLCNKBP51801 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CLCNKBP51801 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKBP51801 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.24■□□□□ 0.51
CLCNKBP51801 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKBP51801 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKBP51801 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKBP51801 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKBP51801 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKBP51801 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKBP51801 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms