Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC9A3P48764 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC9A3P48764 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC9A3P48764 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SLC9A3P48764 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC9A3P48764 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC9A3P48764 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC9A3P48764 AL136379.1-201ENST00000623471 2642 ntBASIC15.81■□□□□ 0.12
SLC9A3P48764 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SLC9A3P48764 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.81■□□□□ 0.12
SLC9A3P48764 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC9A3P48764 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC9A3P48764 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SLC9A3P48764 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC9A3P48764 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SLC9A3P48764 TSPY22P-201ENST00000427496 604 ntBASIC15.81■□□□□ 0.12
SLC9A3P48764 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.81■□□□□ 0.12
SLC9A3P48764 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC9A3P48764 AC103564.2-201ENST00000432853 1299 ntBASIC15.81■□□□□ 0.12
SLC9A3P48764 AC125634.1-201ENST00000438758 1403 ntBASIC15.81■□□□□ 0.12
SLC9A3P48764 AC060834.1-201ENST00000443027 2032 ntBASIC15.81■□□□□ 0.12
SLC9A3P48764 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC9A3P48764 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
SLC9A3P48764 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC9A3P48764 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC9A3P48764 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
SLC9A3P48764 AC019129.2-201ENST00000609837 1235 ntBASIC15.81■□□□□ 0.12
SLC9A3P48764 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SLC9A3P48764 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC9A3P48764 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC9A3P48764 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SLC9A3P48764 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC9A3P48764 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC9A3P48764 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SLC9A3P48764 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
SLC9A3P48764 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC9A3P48764 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC9A3P48764 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SLC9A3P48764 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC9A3P48764 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.8■□□□□ 0.12
SLC9A3P48764 AC111152.3-201ENST00000569699 673 ntBASIC15.8■□□□□ 0.12
SLC9A3P48764 AL592071.1-201ENST00000611956 408 ntBASIC15.8■□□□□ 0.12
SLC9A3P48764 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC9A3P48764 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC9A3P48764 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SLC9A3P48764 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC9A3P48764 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.8■□□□□ 0.12
SLC9A3P48764 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC9A3P48764 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC9A3P48764 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC9A3P48764 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SLC9A3P48764 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SLC9A3P48764 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SLC9A3P48764 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SLC9A3P48764 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms