Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDX1P47902 AGGF1P2-201ENST00000426656 2106 ntBASIC14.11□□□□□ -0.15
CDX1P47902 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDX1P47902 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CDX1P47902 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDX1P47902 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.1□□□□□ -0.15
CDX1P47902 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.1□□□□□ -0.15
CDX1P47902 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.1□□□□□ -0.15
CDX1P47902 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CDX1P47902 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CDX1P47902 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.1□□□□□ -0.15
CDX1P47902 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CDX1P47902 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.1□□□□□ -0.15
CDX1P47902 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.1□□□□□ -0.15
CDX1P47902 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.1□□□□□ -0.15
CDX1P47902 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 CLEC4GP1-201ENST00000596555 870 ntBASIC14.1□□□□□ -0.15
CDX1P47902 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CDX1P47902 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.1□□□□□ -0.15
CDX1P47902 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.1□□□□□ -0.15
CDX1P47902 AL024508.2-201ENST00000607749 1894 ntBASIC14.1□□□□□ -0.15
CDX1P47902 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDX1P47902 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDX1P47902 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDX1P47902 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDX1P47902 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.09□□□□□ -0.15
CDX1P47902 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDX1P47902 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDX1P47902 AC007950.2-201ENST00000615045 2347 ntBASIC14.09□□□□□ -0.15
CDX1P47902 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CDX1P47902 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.09□□□□□ -0.15
CDX1P47902 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CDX1P47902 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.09□□□□□ -0.15
CDX1P47902 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDX1P47902 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.09□□□□□ -0.15
CDX1P47902 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CDX1P47902 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.09□□□□□ -0.15
CDX1P47902 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.09□□□□□ -0.15
CDX1P47902 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.09□□□□□ -0.15
CDX1P47902 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.09□□□□□ -0.15
CDX1P47902 RN7SL606P-201ENST00000472779 293 ntBASIC14.09□□□□□ -0.15
CDX1P47902 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDX1P47902 KRT126P-201ENST00000549467 1181 ntBASIC14.09□□□□□ -0.15
CDX1P47902 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.09□□□□□ -0.15
CDX1P47902 TPSP2-201ENST00000561760 610 ntBASIC14.09□□□□□ -0.15
CDX1P47902 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.09□□□□□ -0.15
CDX1P47902 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDX1P47902 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.09□□□□□ -0.15
CDX1P47902 AC004263.2-201ENST00000617183 678 ntBASIC14.09□□□□□ -0.15
CDX1P47902 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDX1P47902 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CDX1P47902 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDX1P47902 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CDX1P47902 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.09□□□□□ -0.15
CDX1P47902 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.09□□□□□ -0.15
CDX1P47902 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDX1P47902 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CDX1P47902 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDX1P47902 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDX1P47902 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDX1P47902 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.09□□□□□ -0.15
CDX1P47902 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDX1P47902 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDX1P47902 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDX1P47902 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.09□□□□□ -0.15
CDX1P47902 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDX1P47902 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms