Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
HMGCLP35914 GGTLC5P-201ENST00000617623 998 ntBASIC17.09■□□□□ 0.33
HMGCLP35914 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
HMGCLP35914 AC116407.3-201ENST00000623905 1129 ntBASIC17.09■□□□□ 0.33
HMGCLP35914 AC005593.1-201ENST00000624894 515 ntBASIC17.09■□□□□ 0.33
HMGCLP35914 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCLP35914 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCLP35914 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGCLP35914 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCLP35914 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCLP35914 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGCLP35914 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGCLP35914 PI4KAP1-204ENST00000612579 1703 ntBASIC17.09■□□□□ 0.33
HMGCLP35914 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCLP35914 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGCLP35914 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HMGCLP35914 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCLP35914 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCLP35914 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCLP35914 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCLP35914 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCLP35914 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HMGCLP35914 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCLP35914 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HMGCLP35914 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCLP35914 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCLP35914 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCLP35914 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCLP35914 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCLP35914 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMGCLP35914 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMGCLP35914 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
HMGCLP35914 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.08■□□□□ 0.33
HMGCLP35914 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMGCLP35914 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HMGCLP35914 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.33
HMGCLP35914 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.08■□□□□ 0.32
HMGCLP35914 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCLP35914 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.08■□□□□ 0.32
HMGCLP35914 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCLP35914 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCLP35914 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCLP35914 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCLP35914 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCLP35914 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCLP35914 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.08■□□□□ 0.32
HMGCLP35914 AC092910.1-201ENST00000482027 1129 ntBASIC17.08■□□□□ 0.32
HMGCLP35914 IGHV3-65-201ENST00000523210 341 ntBASIC17.08■□□□□ 0.32
HMGCLP35914 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.08■□□□□ 0.32
HMGCLP35914 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.08■□□□□ 0.32
HMGCLP35914 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
HMGCLP35914 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCLP35914 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.08■□□□□ 0.32
HMGCLP35914 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.08■□□□□ 0.32
HMGCLP35914 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCLP35914 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.08■□□□□ 0.32
HMGCLP35914 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HMGCLP35914 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
HMGCLP35914 AC092068.3-201ENST00000587894 2016 ntBASIC17.08■□□□□ 0.32
HMGCLP35914 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCLP35914 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HMGCLP35914 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HMGCLP35914 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCLP35914 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCLP35914 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.07■□□□□ 0.32
HMGCLP35914 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.07■□□□□ 0.32
HMGCLP35914 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.07■□□□□ 0.32
HMGCLP35914 AC080080.1-201ENST00000625121 2420 ntBASIC17.07■□□□□ 0.32
HMGCLP35914 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCLP35914 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCLP35914 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.07■□□□□ 0.32
HMGCLP35914 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCLP35914 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCLP35914 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCLP35914 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCLP35914 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCLP35914 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.07■□□□□ 0.32
HMGCLP35914 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.07■□□□□ 0.32
HMGCLP35914 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.07■□□□□ 0.32
HMGCLP35914 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HMGCLP35914 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCLP35914 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.07■□□□□ 0.32
HMGCLP35914 AC117500.6-201ENST00000624871 588 ntBASIC17.07■□□□□ 0.32
HMGCLP35914 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCLP35914 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HMGCLP35914 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HMGCLP35914 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HMGCLP35914 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCLP35914 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.07■□□□□ 0.32
HMGCLP35914 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCLP35914 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCLP35914 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCLP35914 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCLP35914 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HMGCLP35914 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.06■□□□□ 0.32
HMGCLP35914 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.06■□□□□ 0.32
HMGCLP35914 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HMGCLP35914 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCLP35914 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCLP35914 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms