Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP24386 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP24386 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP24386 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP24386 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP24386 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP24386 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP24386 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP24386 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CHMP24386 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP24386 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP24386 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.12■□□□□ 0.17
CHMP24386 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP24386 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP24386 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.11■□□□□ 0.17
CHMP24386 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.11■□□□□ 0.17
CHMP24386 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 TP73-AS1-210ENST00000637775 1455 ntBASIC16.11■□□□□ 0.17
CHMP24386 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CHMP24386 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.11■□□□□ 0.17
CHMP24386 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CHMP24386 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.11■□□□□ 0.17
CHMP24386 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 NUS1P2-201ENST00000417358 873 ntBASIC16.11■□□□□ 0.17
CHMP24386 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CHMP24386 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 AC096582.2-201ENST00000510860 516 ntBASIC16.11■□□□□ 0.17
CHMP24386 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.11■□□□□ 0.17
CHMP24386 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.11■□□□□ 0.17
CHMP24386 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.11■□□□□ 0.17
CHMP24386 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CHMP24386 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CHMP24386 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.11■□□□□ 0.17
CHMP24386 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CHMP24386 FLJ38576-201ENST00000623820 2459 ntBASIC16.11■□□□□ 0.17
CHMP24386 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.11■□□□□ 0.17
CHMP24386 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CHMP24386 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.11■□□□□ 0.17
CHMP24386 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.11■□□□□ 0.17
CHMP24386 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CHMP24386 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.11■□□□□ 0.17
CHMP24386 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP24386 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CHMP24386 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP24386 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP24386 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP24386 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CHMP24386 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.1■□□□□ 0.17
CHMP24386 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP24386 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP24386 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHMP24386 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP24386 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.1■□□□□ 0.17
CHMP24386 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CHMP24386 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP24386 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.1■□□□□ 0.17
CHMP24386 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP24386 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.1■□□□□ 0.17
CHMP24386 AC096633.1-201ENST00000422446 749 ntBASIC16.1■□□□□ 0.17
CHMP24386 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.1■□□□□ 0.17
CHMP24386 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.1■□□□□ 0.17
CHMP24386 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.1■□□□□ 0.17
CHMP24386 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.1■□□□□ 0.17
CHMP24386 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.1■□□□□ 0.17
CHMP24386 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CHMP24386 RN7SL510P-201ENST00000581311 263 ntBASIC16.1■□□□□ 0.17
CHMP24386 AC011467.2-201ENST00000598425 242 ntBASIC16.1■□□□□ 0.17
CHMP24386 IFNL4P1-201ENST00000607083 540 ntBASIC16.1■□□□□ 0.17
CHMP24386 AL732292.2-201ENST00000609649 430 ntBASIC16.1■□□□□ 0.17
CHMP24386 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.1■□□□□ 0.17
CHMP24386 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.1■□□□□ 0.17
CHMP24386 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CHMP24386 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP24386 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP24386 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP24386 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP24386 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP24386 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP24386 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP24386 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP24386 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP24386 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms