Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ATF1P18846 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
ATF1P18846 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ATF1P18846 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
ATF1P18846 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
ATF1P18846 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.13■□□□□ 0.01
ATF1P18846 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.13■□□□□ 0.01
ATF1P18846 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.13■□□□□ 0.01
ATF1P18846 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
ATF1P18846 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.13■□□□□ 0.01
ATF1P18846 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.13■□□□□ 0.01
ATF1P18846 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.13■□□□□ 0.01
ATF1P18846 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 AC022188.1-201ENST00000620960 1664 ntBASIC15.12■□□□□ 0.01
ATF1P18846 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ATF1P18846 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.12■□□□□ 0.01
ATF1P18846 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ATF1P18846 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.12■□□□□ 0.01
ATF1P18846 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.12■□□□□ 0.01
ATF1P18846 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.12■□□□□ 0.01
ATF1P18846 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ATF1P18846 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 AK4P3-201ENST00000418260 669 ntBASIC15.12■□□□□ 0.01
ATF1P18846 KRT18P57-201ENST00000443599 1254 ntBASIC15.12■□□□□ 0.01
ATF1P18846 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 AC002558.1-201ENST00000488906 803 ntBASIC15.12■□□□□ 0.01
ATF1P18846 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.12■□□□□ 0.01
ATF1P18846 VENTXP5-201ENST00000523979 775 ntBASIC15.12■□□□□ 0.01
ATF1P18846 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.12■□□□□ 0.01
ATF1P18846 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 HYMAI.1-201ENST00000620949 238 ntBASIC15.12■□□□□ 0.01
ATF1P18846 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.12■□□□□ 0.01
ATF1P18846 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.12■□□□□ 0.01
ATF1P18846 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 AC097374.2-201ENST00000618617 1306 ntBASIC15.12■□□□□ 0.01
ATF1P18846 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
ATF1P18846 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ATF1P18846 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATF1P18846 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.11■□□□□ 0.01
ATF1P18846 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.11■□□□□ 0.01
ATF1P18846 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.11■□□□□ 0.01
ATF1P18846 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ATF1P18846 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ATF1P18846 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
ATF1P18846 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ATF1P18846 COX5BP2-201ENST00000392354 334 ntBASIC15.11■□□□□ 0.01
ATF1P18846 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ATF1P18846 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATF1P18846 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.11■□□□□ 0.01
ATF1P18846 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.11■□□□□ 0.01
ATF1P18846 AC092647.4-201ENST00000457211 535 ntBASIC15.11■□□□□ 0.01
ATF1P18846 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.11■□□□□ 0.01
ATF1P18846 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.11■□□□□ 0.01
ATF1P18846 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.11■□□□□ 0.01
ATF1P18846 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms