Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PTPN1P18031 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.16■□□□□ 0.5
PTPN1P18031 SLC25A6P2-201ENST00000497974 877 ntBASIC18.16■□□□□ 0.5
PTPN1P18031 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPN1P18031 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.16■□□□□ 0.5
PTPN1P18031 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PTPN1P18031 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.16■□□□□ 0.5
PTPN1P18031 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN1P18031 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.16■□□□□ 0.5
PTPN1P18031 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PTPN1P18031 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN1P18031 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPN1P18031 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.16■□□□□ 0.5
PTPN1P18031 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN1P18031 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN1P18031 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN1P18031 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN1P18031 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN1P18031 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN1P18031 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN1P18031 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN1P18031 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN1P18031 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN1P18031 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN1P18031 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN1P18031 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN1P18031 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN1P18031 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN1P18031 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.15■□□□□ 0.5
PTPN1P18031 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PTPN1P18031 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN1P18031 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN1P18031 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PTPN1P18031 IGLL3P-201ENST00000412472 434 ntBASIC18.15■□□□□ 0.5
PTPN1P18031 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN1P18031 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPN1P18031 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.15■□□□□ 0.5
PTPN1P18031 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.15■□□□□ 0.5
PTPN1P18031 PGAM5P1-201ENST00000518923 814 ntBASIC18.15■□□□□ 0.5
PTPN1P18031 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPN1P18031 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN1P18031 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.15■□□□□ 0.5
PTPN1P18031 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PTPN1P18031 AC139713.2-201ENST00000641328 2723 ntBASIC18.15■□□□□ 0.5
PTPN1P18031 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN1P18031 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPN1P18031 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN1P18031 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN1P18031 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN1P18031 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PTPN1P18031 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PTPN1P18031 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN1P18031 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN1P18031 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN1P18031 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.14■□□□□ 0.5
PTPN1P18031 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PTPN1P18031 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN1P18031 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PTPN1P18031 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN1P18031 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN1P18031 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN1P18031 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PTPN1P18031 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN1P18031 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PTPN1P18031 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN1P18031 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PTPN1P18031 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN1P18031 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN1P18031 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN1P18031 AL023806.1-201ENST00000603994 1649 ntBASIC18.14■□□□□ 0.49
PTPN1P18031 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN1P18031 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN1P18031 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.14■□□□□ 0.49
PTPN1P18031 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
PTPN1P18031 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN1P18031 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.14■□□□□ 0.49
PTPN1P18031 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.14■□□□□ 0.49
PTPN1P18031 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN1P18031 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN1P18031 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN1P18031 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PTPN1P18031 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PTPN1P18031 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN1P18031 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
PTPN1P18031 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN1P18031 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN1P18031 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN1P18031 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN1P18031 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN1P18031 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN1P18031 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN1P18031 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PTPN1P18031 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN1P18031 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN1P18031 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
PTPN1P18031 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN1P18031 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN1P18031 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PTPN1P18031 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN1P18031 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms