Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TOP1P11387 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TOP1P11387 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TOP1P11387 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TOP1P11387 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TOP1P11387 AC009053.2-201ENST00000563701 2365 ntBASIC20.19■□□□□ 0.82
TOP1P11387 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.18■□□□□ 0.82
TOP1P11387 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.18■□□□□ 0.82
TOP1P11387 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOP1P11387 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.18■□□□□ 0.82
TOP1P11387 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TOP1P11387 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOP1P11387 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOP1P11387 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.18■□□□□ 0.82
TOP1P11387 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.18■□□□□ 0.82
TOP1P11387 AC108073.2-201ENST00000464002 357 ntBASIC20.18■□□□□ 0.82
TOP1P11387 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.18■□□□□ 0.82
TOP1P11387 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOP1P11387 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TOP1P11387 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.18■□□□□ 0.82
TOP1P11387 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
TOP1P11387 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.18■□□□□ 0.82
TOP1P11387 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOP1P11387 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOP1P11387 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TOP1P11387 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOP1P11387 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.18■□□□□ 0.82
TOP1P11387 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOP1P11387 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOP1P11387 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOP1P11387 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TOP1P11387 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOP1P11387 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TOP1P11387 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TOP1P11387 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOP1P11387 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
TOP1P11387 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TOP1P11387 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOP1P11387 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOP1P11387 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.17■□□□□ 0.82
TOP1P11387 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.17■□□□□ 0.82
TOP1P11387 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.17■□□□□ 0.82
TOP1P11387 POLD2P1-201ENST00000511220 997 ntBASIC20.17■□□□□ 0.82
TOP1P11387 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.17■□□□□ 0.82
TOP1P11387 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOP1P11387 TERC-201ENST00000602385 541 ntBASIC20.17■□□□□ 0.82
TOP1P11387 AC140113.2-201ENST00000604370 208 ntBASIC20.17■□□□□ 0.82
TOP1P11387 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.17■□□□□ 0.82
TOP1P11387 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOP1P11387 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TOP1P11387 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TOP1P11387 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOP1P11387 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TOP1P11387 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOP1P11387 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.17■□□□□ 0.82
TOP1P11387 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOP1P11387 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.17■□□□□ 0.82
TOP1P11387 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOP1P11387 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TOP1P11387 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.17■□□□□ 0.82
TOP1P11387 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TOP1P11387 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TOP1P11387 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOP1P11387 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TOP1P11387 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TOP1P11387 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TOP1P11387 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TOP1P11387 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.16■□□□□ 0.82
TOP1P11387 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.16■□□□□ 0.82
TOP1P11387 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TOP1P11387 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.16■□□□□ 0.82
TOP1P11387 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TOP1P11387 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TOP1P11387 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.16■□□□□ 0.82
TOP1P11387 MIR940-201ENST00000401276 94 ntBASIC20.16■□□□□ 0.82
TOP1P11387 MED15P5-201ENST00000423150 992 ntBASIC20.16■□□□□ 0.82
TOP1P11387 AL591424.1-201ENST00000442569 1213 ntBASIC20.16■□□□□ 0.82
TOP1P11387 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.16■□□□□ 0.82
TOP1P11387 FAM197Y3-203ENST00000618346 717 ntBASIC20.16■□□□□ 0.82
TOP1P11387 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TOP1P11387 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.16■□□□□ 0.82
TOP1P11387 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.16■□□□□ 0.82
TOP1P11387 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TOP1P11387 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TOP1P11387 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TOP1P11387 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TOP1P11387 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOP1P11387 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOP1P11387 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TOP1P11387 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.15■□□□□ 0.82
TOP1P11387 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TOP1P11387 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOP1P11387 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOP1P11387 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TOP1P11387 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOP1P11387 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOP1P11387 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TOP1P11387 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.15■□□□□ 0.82
TOP1P11387 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TOP1P11387 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms