Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FAM228BP0C875 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FAM228BP0C875 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FAM228BP0C875 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FAM228BP0C875 IGHV3-47-201ENST00000425060 335 ntBASIC18.33■□□□□ 0.52
FAM228BP0C875 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.33■□□□□ 0.52
FAM228BP0C875 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
FAM228BP0C875 KRT17P6-201ENST00000453795 1220 ntBASIC18.33■□□□□ 0.52
FAM228BP0C875 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.33■□□□□ 0.52
FAM228BP0C875 TOB2P1-201ENST00000469761 992 ntBASIC18.33■□□□□ 0.52
FAM228BP0C875 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.33■□□□□ 0.52
FAM228BP0C875 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.33■□□□□ 0.52
FAM228BP0C875 AL049597.2-201ENST00000565575 961 ntBASIC18.33■□□□□ 0.52
FAM228BP0C875 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.33■□□□□ 0.52
FAM228BP0C875 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
FAM228BP0C875 Z69720.1-201ENST00000601483 472 ntBASIC18.33■□□□□ 0.52
FAM228BP0C875 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FAM228BP0C875 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FAM228BP0C875 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FAM228BP0C875 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
FAM228BP0C875 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FAM228BP0C875 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FAM228BP0C875 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.33■□□□□ 0.52
FAM228BP0C875 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FAM228BP0C875 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.33■□□□□ 0.52
FAM228BP0C875 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FAM228BP0C875 AL662844.4-201ENST00000606367 2838 ntBASIC18.33■□□□□ 0.52
FAM228BP0C875 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FAM228BP0C875 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FAM228BP0C875 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
FAM228BP0C875 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FAM228BP0C875 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FAM228BP0C875 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.33■□□□□ 0.52
FAM228BP0C875 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.33■□□□□ 0.52
FAM228BP0C875 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.33■□□□□ 0.52
FAM228BP0C875 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FAM228BP0C875 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
FAM228BP0C875 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FAM228BP0C875 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.32■□□□□ 0.52
FAM228BP0C875 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
FAM228BP0C875 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
FAM228BP0C875 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FAM228BP0C875 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FAM228BP0C875 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FAM228BP0C875 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FAM228BP0C875 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
FAM228BP0C875 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FAM228BP0C875 PCED1CP-201ENST00000419887 785 ntBASIC18.32■□□□□ 0.52
FAM228BP0C875 NUS1P1-201ENST00000446295 882 ntBASIC18.32■□□□□ 0.52
FAM228BP0C875 MINOS1P3-201ENST00000457048 203 ntBASIC18.32■□□□□ 0.52
FAM228BP0C875 AC096582.2-201ENST00000510860 516 ntBASIC18.32■□□□□ 0.52
FAM228BP0C875 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.32■□□□□ 0.52
FAM228BP0C875 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.32■□□□□ 0.52
FAM228BP0C875 AP002414.4-201ENST00000589764 1148 ntBASIC18.32■□□□□ 0.52
FAM228BP0C875 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.32■□□□□ 0.52
FAM228BP0C875 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.32■□□□□ 0.52
FAM228BP0C875 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.32■□□□□ 0.52
FAM228BP0C875 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.32■□□□□ 0.52
FAM228BP0C875 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FAM228BP0C875 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
FAM228BP0C875 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
FAM228BP0C875 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FAM228BP0C875 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.32■□□□□ 0.52
FAM228BP0C875 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.32■□□□□ 0.52
FAM228BP0C875 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.32■□□□□ 0.52
FAM228BP0C875 AC006449.5-201ENST00000610658 2098 ntBASIC18.32■□□□□ 0.52
FAM228BP0C875 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FAM228BP0C875 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
FAM228BP0C875 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FAM228BP0C875 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FAM228BP0C875 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
FAM228BP0C875 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FAM228BP0C875 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FAM228BP0C875 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.31■□□□□ 0.52
FAM228BP0C875 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FAM228BP0C875 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FAM228BP0C875 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.31■□□□□ 0.52
FAM228BP0C875 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FAM228BP0C875 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FAM228BP0C875 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
FAM228BP0C875 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
FAM228BP0C875 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FAM228BP0C875 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FAM228BP0C875 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.31■□□□□ 0.52
FAM228BP0C875 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.31■□□□□ 0.52
FAM228BP0C875 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FAM228BP0C875 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.31■□□□□ 0.52
FAM228BP0C875 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.31■□□□□ 0.52
FAM228BP0C875 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
FAM228BP0C875 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FAM228BP0C875 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FAM228BP0C875 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FAM228BP0C875 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
FAM228BP0C875 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FAM228BP0C875 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
FAM228BP0C875 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FAM228BP0C875 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
FAM228BP0C875 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.31■□□□□ 0.52
FAM228BP0C875 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.31■□□□□ 0.52
FAM228BP0C875 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms