Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.27■□□□□ 0.36
MMP2P08253 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.27■□□□□ 0.36
MMP2P08253 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.27■□□□□ 0.36
MMP2P08253 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.27■□□□□ 0.36
MMP2P08253 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
MMP2P08253 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.27■□□□□ 0.36
MMP2P08253 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.27■□□□□ 0.36
MMP2P08253 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MMP2P08253 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MMP2P08253 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MMP2P08253 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MMP2P08253 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
MMP2P08253 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MMP2P08253 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.27■□□□□ 0.35
MMP2P08253 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.27■□□□□ 0.35
MMP2P08253 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.35
MMP2P08253 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
MMP2P08253 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.27■□□□□ 0.35
MMP2P08253 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
MMP2P08253 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
MMP2P08253 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP2P08253 PRORSD1P-202ENST00000563365 2154 ntBASIC17.26■□□□□ 0.35
MMP2P08253 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.26■□□□□ 0.35
MMP2P08253 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP2P08253 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP2P08253 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.26■□□□□ 0.35
MMP2P08253 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MMP2P08253 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP2P08253 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MMP2P08253 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.26■□□□□ 0.35
MMP2P08253 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.26■□□□□ 0.35
MMP2P08253 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP2P08253 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
MMP2P08253 AL662844.1-201ENST00000546340 181 ntBASIC17.26■□□□□ 0.35
MMP2P08253 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.26■□□□□ 0.35
MMP2P08253 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
MMP2P08253 AP001005.1-201ENST00000571755 1248 ntBASIC17.26■□□□□ 0.35
MMP2P08253 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.26■□□□□ 0.35
MMP2P08253 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.26■□□□□ 0.35
MMP2P08253 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
MMP2P08253 AC116407.3-201ENST00000623905 1129 ntBASIC17.26■□□□□ 0.35
MMP2P08253 AC117500.6-201ENST00000624871 588 ntBASIC17.26■□□□□ 0.35
MMP2P08253 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MMP2P08253 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP2P08253 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MMP2P08253 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP2P08253 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MMP2P08253 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.26■□□□□ 0.35
MMP2P08253 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP2P08253 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.26■□□□□ 0.35
MMP2P08253 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP2P08253 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
MMP2P08253 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.25■□□□□ 0.35
MMP2P08253 AC106886.4-201ENST00000623557 2502 ntBASIC17.25■□□□□ 0.35
MMP2P08253 AC009053.2-201ENST00000563701 2365 ntBASIC17.25■□□□□ 0.35
MMP2P08253 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP2P08253 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.25■□□□□ 0.35
MMP2P08253 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
MMP2P08253 PI4KAP1-204ENST00000612579 1703 ntBASIC17.25■□□□□ 0.35
MMP2P08253 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP2P08253 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
MMP2P08253 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP2P08253 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
MMP2P08253 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.25■□□□□ 0.35
MMP2P08253 AC087163.2-201ENST00000457299 853 ntBASIC17.25■□□□□ 0.35
MMP2P08253 AC092910.1-201ENST00000482027 1129 ntBASIC17.25■□□□□ 0.35
MMP2P08253 SLC25A6P2-201ENST00000497974 877 ntBASIC17.25■□□□□ 0.35
MMP2P08253 IGHV3-65-201ENST00000523210 341 ntBASIC17.25■□□□□ 0.35
MMP2P08253 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.25■□□□□ 0.35
MMP2P08253 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.25■□□□□ 0.35
MMP2P08253 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.25■□□□□ 0.35
MMP2P08253 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.25■□□□□ 0.35
MMP2P08253 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.25■□□□□ 0.35
MMP2P08253 AC008667.4-201ENST00000607370 168 ntBASIC17.25■□□□□ 0.35
MMP2P08253 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.25■□□□□ 0.35
MMP2P08253 AF228730.7-201ENST00000641842 219 ntBASIC17.25■□□□□ 0.35
MMP2P08253 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MMP2P08253 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
MMP2P08253 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
MMP2P08253 PCDHB17P-201ENST00000539533 2393 ntBASIC17.25■□□□□ 0.35
MMP2P08253 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP2P08253 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP2P08253 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP2P08253 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP2P08253 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP2P08253 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MMP2P08253 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP2P08253 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP2P08253 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.24■□□□□ 0.35
MMP2P08253 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
MMP2P08253 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MMP2P08253 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP2P08253 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.24■□□□□ 0.35
MMP2P08253 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.24■□□□□ 0.35
MMP2P08253 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MMP2P08253 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP2P08253 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
MMP2P08253 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP2P08253 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP2P08253 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms