Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.54■□□□□ 0.88
POLR3DP05423 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR3DP05423 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
POLR3DP05423 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.54■□□□□ 0.88
POLR3DP05423 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR3DP05423 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR3DP05423 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
POLR3DP05423 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
POLR3DP05423 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.54■□□□□ 0.88
POLR3DP05423 AC108860.2-201ENST00000562760 2183 ntBASIC20.54■□□□□ 0.88
POLR3DP05423 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
POLR3DP05423 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR3DP05423 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR3DP05423 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.54■□□□□ 0.88
POLR3DP05423 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR3DP05423 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
POLR3DP05423 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
POLR3DP05423 MRPL20P1-201ENST00000400819 433 ntBASIC20.54■□□□□ 0.88
POLR3DP05423 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.54■□□□□ 0.88
POLR3DP05423 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
POLR3DP05423 PRSS29P-201ENST00000440800 595 ntBASIC20.54■□□□□ 0.88
POLR3DP05423 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.54■□□□□ 0.88
POLR3DP05423 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.54■□□□□ 0.88
POLR3DP05423 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.54■□□□□ 0.88
POLR3DP05423 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.54■□□□□ 0.88
POLR3DP05423 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
POLR3DP05423 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
POLR3DP05423 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR3DP05423 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.54■□□□□ 0.88
POLR3DP05423 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.54■□□□□ 0.88
POLR3DP05423 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR3DP05423 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.54■□□□□ 0.88
POLR3DP05423 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR3DP05423 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
POLR3DP05423 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.54■□□□□ 0.88
POLR3DP05423 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLR3DP05423 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR3DP05423 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
POLR3DP05423 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLR3DP05423 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.53■□□□□ 0.88
POLR3DP05423 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
POLR3DP05423 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.53■□□□□ 0.88
POLR3DP05423 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR3DP05423 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
POLR3DP05423 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLR3DP05423 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLR3DP05423 MIR1233-2-201ENST00000408138 82 ntBASIC20.53■□□□□ 0.88
POLR3DP05423 MIR1233-1-201ENST00000408722 82 ntBASIC20.53■□□□□ 0.88
POLR3DP05423 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.53■□□□□ 0.88
POLR3DP05423 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLR3DP05423 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR3DP05423 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.53■□□□□ 0.88
POLR3DP05423 AC133963.1-201ENST00000504166 1679 ntBASIC20.53■□□□□ 0.88
POLR3DP05423 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.53■□□□□ 0.88
POLR3DP05423 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
POLR3DP05423 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLR3DP05423 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR3DP05423 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR3DP05423 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
POLR3DP05423 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.53■□□□□ 0.88
POLR3DP05423 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR3DP05423 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLR3DP05423 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.53■□□□□ 0.88
POLR3DP05423 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLR3DP05423 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.52■□□□□ 0.88
POLR3DP05423 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.52■□□□□ 0.88
POLR3DP05423 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
POLR3DP05423 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
POLR3DP05423 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
POLR3DP05423 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
POLR3DP05423 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.52■□□□□ 0.88
POLR3DP05423 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
POLR3DP05423 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
POLR3DP05423 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
POLR3DP05423 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.52■□□□□ 0.88
POLR3DP05423 HCG4B-203ENST00000450128 991 ntBASIC20.52■□□□□ 0.88
POLR3DP05423 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.52■□□□□ 0.88
POLR3DP05423 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
POLR3DP05423 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.52■□□□□ 0.88
POLR3DP05423 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.52■□□□□ 0.88
POLR3DP05423 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
POLR3DP05423 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.52■□□□□ 0.88
POLR3DP05423 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.52■□□□□ 0.88
POLR3DP05423 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.52■□□□□ 0.88
POLR3DP05423 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.52■□□□□ 0.88
POLR3DP05423 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
POLR3DP05423 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
POLR3DP05423 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
POLR3DP05423 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
POLR3DP05423 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
POLR3DP05423 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
POLR3DP05423 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
POLR3DP05423 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
POLR3DP05423 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
POLR3DP05423 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
POLR3DP05423 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
POLR3DP05423 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
POLR3DP05423 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
POLR3DP05423 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.51■□□□□ 0.87
POLR3DP05423 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms