Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHGBP05060 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CHGBP05060 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHGBP05060 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHGBP05060 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.59■□□□□ 0.89
CHGBP05060 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHGBP05060 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.59■□□□□ 0.89
CHGBP05060 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHGBP05060 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHGBP05060 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHGBP05060 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.58■□□□□ 0.89
CHGBP05060 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.58■□□□□ 0.89
CHGBP05060 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHGBP05060 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.58■□□□□ 0.89
CHGBP05060 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CHGBP05060 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.58■□□□□ 0.89
CHGBP05060 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHGBP05060 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CHGBP05060 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CHGBP05060 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.58■□□□□ 0.89
CHGBP05060 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHGBP05060 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.58■□□□□ 0.89
CHGBP05060 AC092865.6-201ENST00000642101 219 ntBASIC20.58■□□□□ 0.89
CHGBP05060 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHGBP05060 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHGBP05060 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHGBP05060 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CHGBP05060 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CHGBP05060 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHGBP05060 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHGBP05060 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CHGBP05060 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CHGBP05060 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGBP05060 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGBP05060 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.57■□□□□ 0.88
CHGBP05060 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CHGBP05060 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.57■□□□□ 0.88
CHGBP05060 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CHGBP05060 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGBP05060 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGBP05060 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGBP05060 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CHGBP05060 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.57■□□□□ 0.88
CHGBP05060 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CHGBP05060 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHGBP05060 MED15P5-201ENST00000423150 992 ntBASIC20.57■□□□□ 0.88
CHGBP05060 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGBP05060 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGBP05060 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.57■□□□□ 0.88
CHGBP05060 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.57■□□□□ 0.88
CHGBP05060 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.57■□□□□ 0.88
CHGBP05060 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.57■□□□□ 0.88
CHGBP05060 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.57■□□□□ 0.88
CHGBP05060 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.57■□□□□ 0.88
CHGBP05060 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGBP05060 REXO1L3P-201ENST00000622202 1288 ntBASIC20.57■□□□□ 0.88
CHGBP05060 AC010507.1-201ENST00000633895 436 ntBASIC20.57■□□□□ 0.88
CHGBP05060 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGBP05060 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.57■□□□□ 0.88
CHGBP05060 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGBP05060 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
CHGBP05060 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHGBP05060 RNF216P1-203ENST00000404404 2427 ntBASIC20.56■□□□□ 0.88
CHGBP05060 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHGBP05060 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.56■□□□□ 0.88
CHGBP05060 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CHGBP05060 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.56■□□□□ 0.88
CHGBP05060 KRT18P3-201ENST00000451602 1288 ntBASIC20.56■□□□□ 0.88
CHGBP05060 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.56■□□□□ 0.88
CHGBP05060 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CHGBP05060 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.56■□□□□ 0.88
CHGBP05060 ACTL9-202ENST00000612068 1252 ntBASIC20.56■□□□□ 0.88
CHGBP05060 AL513190.1-201ENST00000621254 727 ntBASIC20.56■□□□□ 0.88
CHGBP05060 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CHGBP05060 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHGBP05060 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.56■□□□□ 0.88
CHGBP05060 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHGBP05060 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CHGBP05060 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.56■□□□□ 0.88
CHGBP05060 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.56■□□□□ 0.88
CHGBP05060 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHGBP05060 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHGBP05060 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHGBP05060 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHGBP05060 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHGBP05060 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHGBP05060 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHGBP05060 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.55■□□□□ 0.88
CHGBP05060 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
CHGBP05060 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.55■□□□□ 0.88
CHGBP05060 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGBP05060 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHGBP05060 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGBP05060 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHGBP05060 AC005915.1-201ENST00000624912 2018 ntBASIC20.55■□□□□ 0.88
CHGBP05060 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHGBP05060 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGBP05060 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGBP05060 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHGBP05060 PCDHB17P-201ENST00000539533 2393 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms