Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB4AP04350 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB4AP04350 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.45■□□□□ 0.54
TUBB4AP04350 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.45■□□□□ 0.54
TUBB4AP04350 FAM197Y1-201ENST00000421178 764 ntBASIC18.45■□□□□ 0.54
TUBB4AP04350 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.45■□□□□ 0.54
TUBB4AP04350 AC093827.2-201ENST00000512654 315 ntBASIC18.45■□□□□ 0.54
TUBB4AP04350 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.45■□□□□ 0.54
TUBB4AP04350 AC023824.1-201ENST00000562945 2975 ntBASIC18.45■□□□□ 0.54
TUBB4AP04350 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.45■□□□□ 0.54
TUBB4AP04350 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB4AP04350 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB4AP04350 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.45■□□□□ 0.54
TUBB4AP04350 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB4AP04350 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB4AP04350 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB4AP04350 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TUBB4AP04350 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB4AP04350 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB4AP04350 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB4AP04350 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB4AP04350 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB4AP04350 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB4AP04350 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB4AP04350 AL645728.1-201ENST00000366221 2101 ntBASIC18.44■□□□□ 0.54
TUBB4AP04350 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.44■□□□□ 0.54
TUBB4AP04350 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB4AP04350 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB4AP04350 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB4AP04350 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB4AP04350 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB4AP04350 AC092338.2-201ENST00000568827 1415 ntBASIC18.44■□□□□ 0.54
TUBB4AP04350 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB4AP04350 COX5BP2-201ENST00000392354 334 ntBASIC18.44■□□□□ 0.54
TUBB4AP04350 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.44■□□□□ 0.54
TUBB4AP04350 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.44■□□□□ 0.54
TUBB4AP04350 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.44■□□□□ 0.54
TUBB4AP04350 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.44■□□□□ 0.54
TUBB4AP04350 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.44■□□□□ 0.54
TUBB4AP04350 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.44■□□□□ 0.54
TUBB4AP04350 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB4AP04350 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.44■□□□□ 0.54
TUBB4AP04350 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TUBB4AP04350 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB4AP04350 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TUBB4AP04350 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB4AP04350 ALOX12P2-203ENST00000570921 1945 ntBASIC18.44■□□□□ 0.54
TUBB4AP04350 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB4AP04350 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB4AP04350 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB4AP04350 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TUBB4AP04350 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB4AP04350 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.44■□□□□ 0.54
TUBB4AP04350 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB4AP04350 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB4AP04350 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.44■□□□□ 0.54
TUBB4AP04350 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB4AP04350 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.44■□□□□ 0.54
TUBB4AP04350 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB4AP04350 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TUBB4AP04350 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBB4AP04350 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TUBB4AP04350 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TUBB4AP04350 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.43■□□□□ 0.54
TUBB4AP04350 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TUBB4AP04350 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.43■□□□□ 0.54
TUBB4AP04350 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBB4AP04350 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBB4AP04350 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.43■□□□□ 0.54
TUBB4AP04350 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.43■□□□□ 0.54
TUBB4AP04350 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TUBB4AP04350 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TUBB4AP04350 CCR12P-201ENST00000446203 998 ntBASIC18.43■□□□□ 0.54
TUBB4AP04350 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBB4AP04350 IGHV3-52-201ENST00000519770 353 ntBASIC18.43■□□□□ 0.54
TUBB4AP04350 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TUBB4AP04350 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.43■□□□□ 0.54
TUBB4AP04350 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.43■□□□□ 0.54
TUBB4AP04350 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TUBB4AP04350 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.43■□□□□ 0.54
TUBB4AP04350 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.43■□□□□ 0.54
TUBB4AP04350 CD177P1-201ENST00000606252 935 ntBASIC18.43■□□□□ 0.54
TUBB4AP04350 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
TUBB4AP04350 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TUBB4AP04350 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.43■□□□□ 0.54
TUBB4AP04350 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.43■□□□□ 0.54
TUBB4AP04350 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.43■□□□□ 0.54
TUBB4AP04350 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TUBB4AP04350 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBB4AP04350 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBB4AP04350 AC097374.2-201ENST00000618617 1306 ntBASIC18.43■□□□□ 0.54
TUBB4AP04350 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBB4AP04350 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
TUBB4AP04350 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.43■□□□□ 0.54
TUBB4AP04350 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBB4AP04350 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBB4AP04350 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBB4AP04350 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TUBB4AP04350 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBB4AP04350 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms