Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KRT6AP02538 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT6AP02538 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT6AP02538 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT6AP02538 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 AC092053.1-201ENST00000605787 1936 ntBASIC16.7■□□□□ 0.26
KRT6AP02538 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT6AP02538 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
KRT6AP02538 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.7■□□□□ 0.26
KRT6AP02538 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT6AP02538 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
KRT6AP02538 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT6AP02538 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT6AP02538 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
KRT6AP02538 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT6AP02538 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KRT6AP02538 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT6AP02538 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT6AP02538 AC132938.5-201ENST00000624980 1813 ntBASIC16.69■□□□□ 0.26
KRT6AP02538 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
KRT6AP02538 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT6AP02538 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT6AP02538 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT6AP02538 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
KRT6AP02538 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
KRT6AP02538 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.69■□□□□ 0.26
KRT6AP02538 KRT17P6-201ENST00000453795 1220 ntBASIC16.69■□□□□ 0.26
KRT6AP02538 TOB2P1-201ENST00000469761 992 ntBASIC16.69■□□□□ 0.26
KRT6AP02538 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.69■□□□□ 0.26
KRT6AP02538 TPSP2-201ENST00000561760 610 ntBASIC16.69■□□□□ 0.26
KRT6AP02538 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
KRT6AP02538 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
KRT6AP02538 AP002414.4-201ENST00000589764 1148 ntBASIC16.69■□□□□ 0.26
KRT6AP02538 AC073592.5-201ENST00000624854 528 ntBASIC16.69■□□□□ 0.26
KRT6AP02538 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.69■□□□□ 0.26
KRT6AP02538 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT6AP02538 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT6AP02538 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT6AP02538 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT6AP02538 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT6AP02538 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT6AP02538 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT6AP02538 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
KRT6AP02538 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT6AP02538 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT6AP02538 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT6AP02538 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT6AP02538 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
KRT6AP02538 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT6AP02538 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
KRT6AP02538 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
KRT6AP02538 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT6AP02538 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.68■□□□□ 0.26
KRT6AP02538 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT6AP02538 AC105020.1-201ENST00000435356 2205 ntBASIC16.68■□□□□ 0.26
KRT6AP02538 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT6AP02538 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
KRT6AP02538 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT6AP02538 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT6AP02538 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.68■□□□□ 0.26
KRT6AP02538 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.68■□□□□ 0.26
KRT6AP02538 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT6AP02538 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.68■□□□□ 0.26
KRT6AP02538 AC096582.2-201ENST00000510860 516 ntBASIC16.68■□□□□ 0.26
KRT6AP02538 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.68■□□□□ 0.26
KRT6AP02538 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.68■□□□□ 0.26
KRT6AP02538 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
KRT6AP02538 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT6AP02538 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT6AP02538 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT6AP02538 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT6AP02538 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.68■□□□□ 0.26
KRT6AP02538 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
KRT6AP02538 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT6AP02538 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT6AP02538 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.68■□□□□ 0.26
KRT6AP02538 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT6AP02538 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT6AP02538 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT6AP02538 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT6AP02538 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
KRT6AP02538 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
KRT6AP02538 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
KRT6AP02538 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 AC005915.1-201ENST00000624912 2018 ntBASIC16.67■□□□□ 0.26
KRT6AP02538 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms