Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CNOT4O95628 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT4O95628 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT4O95628 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CNOT4O95628 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CNOT4O95628 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.31■□□□□ 0.04
CNOT4O95628 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT4O95628 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.31■□□□□ 0.04
CNOT4O95628 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT4O95628 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT4O95628 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT4O95628 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT4O95628 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.31■□□□□ 0.04
CNOT4O95628 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CNOT4O95628 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.31■□□□□ 0.04
CNOT4O95628 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.31■□□□□ 0.04
CNOT4O95628 MIR7706-201ENST00000613747 67 ntBASIC15.31■□□□□ 0.04
CNOT4O95628 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.31■□□□□ 0.04
CNOT4O95628 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.31■□□□□ 0.04
CNOT4O95628 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CNOT4O95628 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT4O95628 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT4O95628 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT4O95628 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT4O95628 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT4O95628 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT4O95628 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
CNOT4O95628 GNAS-203ENST00000306120 1878 ntBASIC15.31■□□□□ 0.04
CNOT4O95628 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT4O95628 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT4O95628 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT4O95628 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CNOT4O95628 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT4O95628 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT4O95628 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT4O95628 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CNOT4O95628 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT4O95628 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT4O95628 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT4O95628 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT4O95628 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT4O95628 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT4O95628 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT4O95628 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT4O95628 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT4O95628 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CNOT4O95628 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CNOT4O95628 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CNOT4O95628 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CNOT4O95628 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT4O95628 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT4O95628 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT4O95628 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT4O95628 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.3■□□□□ 0.04
CNOT4O95628 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.3■□□□□ 0.04
CNOT4O95628 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.3■□□□□ 0.04
CNOT4O95628 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.3■□□□□ 0.04
CNOT4O95628 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT4O95628 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CNOT4O95628 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT4O95628 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.3■□□□□ 0.04
CNOT4O95628 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.3■□□□□ 0.04
CNOT4O95628 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.3■□□□□ 0.04
CNOT4O95628 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.3■□□□□ 0.04
CNOT4O95628 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.3■□□□□ 0.04
CNOT4O95628 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT4O95628 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.3■□□□□ 0.04
CNOT4O95628 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT4O95628 AL049840.3-201ENST00000602669 611 ntBASIC15.3■□□□□ 0.04
CNOT4O95628 AL139424.1-201ENST00000607572 797 ntBASIC15.3■□□□□ 0.04
CNOT4O95628 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
CNOT4O95628 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CNOT4O95628 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CNOT4O95628 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT4O95628 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CNOT4O95628 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT4O95628 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT4O95628 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CNOT4O95628 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.29■□□□□ 0.04
CNOT4O95628 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT4O95628 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.29■□□□□ 0.04
CNOT4O95628 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT4O95628 AC004817.3-201ENST00000602957 2129 ntBASIC15.29■□□□□ 0.04
CNOT4O95628 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT4O95628 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.29■□□□□ 0.04
CNOT4O95628 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.29■□□□□ 0.04
CNOT4O95628 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.29■□□□□ 0.04
CNOT4O95628 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT4O95628 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.29■□□□□ 0.04
CNOT4O95628 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT4O95628 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CNOT4O95628 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT4O95628 GPR89P-201ENST00000407924 1495 ntBASIC15.29■□□□□ 0.04
CNOT4O95628 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.29■□□□□ 0.04
CNOT4O95628 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT4O95628 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT4O95628 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.29■□□□□ 0.04
CNOT4O95628 AC136632.2-201ENST00000512891 861 ntBASIC15.29■□□□□ 0.04
CNOT4O95628 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.29■□□□□ 0.04
CNOT4O95628 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms