Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH16O75309 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CDH16O75309 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH16O75309 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH16O75309 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH16O75309 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH16O75309 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CDH16O75309 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH16O75309 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH16O75309 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH16O75309 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH16O75309 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH16O75309 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH16O75309 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH16O75309 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH16O75309 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH16O75309 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH16O75309 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH16O75309 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDH16O75309 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH16O75309 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH16O75309 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH16O75309 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.41■□□□□ 0.38
CDH16O75309 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.41■□□□□ 0.38
CDH16O75309 AC109462.3-201ENST00000573934 613 ntBASIC17.41■□□□□ 0.38
CDH16O75309 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.41■□□□□ 0.38
CDH16O75309 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH16O75309 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CDH16O75309 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH16O75309 HLA-A-202ENST00000376806 1854 ntBASIC17.41■□□□□ 0.38
CDH16O75309 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH16O75309 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH16O75309 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH16O75309 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH16O75309 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH16O75309 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CDH16O75309 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH16O75309 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH16O75309 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH16O75309 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH16O75309 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH16O75309 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH16O75309 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH16O75309 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH16O75309 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH16O75309 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.4■□□□□ 0.38
CDH16O75309 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDH16O75309 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH16O75309 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDH16O75309 AP002490.2-201ENST00000524791 560 ntBASIC17.4■□□□□ 0.38
CDH16O75309 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDH16O75309 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH16O75309 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH16O75309 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH16O75309 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH16O75309 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CDH16O75309 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDH16O75309 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH16O75309 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH16O75309 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDH16O75309 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDH16O75309 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH16O75309 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDH16O75309 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH16O75309 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH16O75309 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH16O75309 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH16O75309 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH16O75309 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDH16O75309 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
CDH16O75309 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH16O75309 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH16O75309 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH16O75309 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDH16O75309 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
CDH16O75309 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.39■□□□□ 0.38
CDH16O75309 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDH16O75309 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDH16O75309 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.39■□□□□ 0.37
CDH16O75309 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH16O75309 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.39■□□□□ 0.37
CDH16O75309 AP003733.1-201ENST00000491725 852 ntBASIC17.39■□□□□ 0.37
CDH16O75309 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH16O75309 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.39■□□□□ 0.37
CDH16O75309 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
CDH16O75309 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH16O75309 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms