Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNAI2O43623 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
SNAI2O43623 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNAI2O43623 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNAI2O43623 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNAI2O43623 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNAI2O43623 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.93□□□□□ -0.34
SNAI2O43623 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.93□□□□□ -0.34
SNAI2O43623 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNAI2O43623 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.93□□□□□ -0.34
SNAI2O43623 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.93□□□□□ -0.34
SNAI2O43623 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SNAI2O43623 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNAI2O43623 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SNAI2O43623 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.92□□□□□ -0.34
SNAI2O43623 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SNAI2O43623 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.92□□□□□ -0.34
SNAI2O43623 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SNAI2O43623 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.92□□□□□ -0.34
SNAI2O43623 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.92□□□□□ -0.34
SNAI2O43623 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.92□□□□□ -0.34
SNAI2O43623 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 CD99P1-205ENST00000527459 561 ntBASIC12.92□□□□□ -0.34
SNAI2O43623 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.92□□□□□ -0.34
SNAI2O43623 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC12.92□□□□□ -0.34
SNAI2O43623 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.92□□□□□ -0.34
SNAI2O43623 LINC01311-201ENST00000565162 1445 ntBASIC12.92□□□□□ -0.34
SNAI2O43623 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.92□□□□□ -0.34
SNAI2O43623 AC024243.1-201ENST00000609234 778 ntBASIC12.92□□□□□ -0.34
SNAI2O43623 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.92□□□□□ -0.34
SNAI2O43623 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
SNAI2O43623 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SNAI2O43623 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.92□□□□□ -0.34
SNAI2O43623 LINC02228-204ENST00000642115 2962 ntBASIC12.92□□□□□ -0.34
SNAI2O43623 AL161772.1-201ENST00000610494 4412 ntBASIC12.92□□□□□ -0.34
SNAI2O43623 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.92□□□□□ -0.34
SNAI2O43623 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNAI2O43623 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.92□□□□□ -0.34
SNAI2O43623 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
SNAI2O43623 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SNAI2O43623 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.91□□□□□ -0.34
SNAI2O43623 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
SNAI2O43623 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
SNAI2O43623 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SNAI2O43623 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.91□□□□□ -0.34
SNAI2O43623 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC12.91□□□□□ -0.34
SNAI2O43623 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.91□□□□□ -0.34
SNAI2O43623 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
SNAI2O43623 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SNAI2O43623 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNAI2O43623 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms