Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PHGDHO43175 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.13■□□□□ 0.33
PHGDHO43175 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.13■□□□□ 0.33
PHGDHO43175 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.13■□□□□ 0.33
PHGDHO43175 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHGDHO43175 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PHGDHO43175 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHGDHO43175 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PHGDHO43175 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PHGDHO43175 TP73-AS1-210ENST00000637775 1455 ntBASIC17.13■□□□□ 0.33
PHGDHO43175 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHGDHO43175 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PHGDHO43175 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.13■□□□□ 0.33
PHGDHO43175 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHGDHO43175 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHGDHO43175 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHGDHO43175 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.13■□□□□ 0.33
PHGDHO43175 KLF4P1-201ENST00000412782 1185 ntBASIC17.13■□□□□ 0.33
PHGDHO43175 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.13■□□□□ 0.33
PHGDHO43175 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.13■□□□□ 0.33
PHGDHO43175 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHGDHO43175 TSSC2-201ENST00000450217 709 ntBASIC17.13■□□□□ 0.33
PHGDHO43175 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.13■□□□□ 0.33
PHGDHO43175 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHGDHO43175 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.13■□□□□ 0.33
PHGDHO43175 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PHGDHO43175 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PHGDHO43175 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PHGDHO43175 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHGDHO43175 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHGDHO43175 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.13■□□□□ 0.33
PHGDHO43175 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PHGDHO43175 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHGDHO43175 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.13■□□□□ 0.33
PHGDHO43175 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PHGDHO43175 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.13■□□□□ 0.33
PHGDHO43175 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHGDHO43175 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHGDHO43175 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHGDHO43175 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.13■□□□□ 0.33
PHGDHO43175 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PHGDHO43175 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHGDHO43175 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHGDHO43175 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.12■□□□□ 0.33
PHGDHO43175 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHGDHO43175 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.12■□□□□ 0.33
PHGDHO43175 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHGDHO43175 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHGDHO43175 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
PHGDHO43175 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PHGDHO43175 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHGDHO43175 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PHGDHO43175 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHGDHO43175 FER1L4-210ENST00000615531 5998 ntBASIC17.12■□□□□ 0.33
PHGDHO43175 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHGDHO43175 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.12■□□□□ 0.33
PHGDHO43175 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.12■□□□□ 0.33
PHGDHO43175 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHGDHO43175 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.12■□□□□ 0.33
PHGDHO43175 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
PHGDHO43175 AC124947.2-201ENST00000547118 1133 ntBASIC17.12■□□□□ 0.33
PHGDHO43175 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.12■□□□□ 0.33
PHGDHO43175 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.12■□□□□ 0.33
PHGDHO43175 AD001527.2-201ENST00000622994 785 ntBASIC17.12■□□□□ 0.33
PHGDHO43175 AC116407.4-201ENST00000623319 1061 ntBASIC17.12■□□□□ 0.33
PHGDHO43175 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
PHGDHO43175 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHGDHO43175 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHGDHO43175 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.12■□□□□ 0.33
PHGDHO43175 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHGDHO43175 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PHGDHO43175 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHGDHO43175 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHGDHO43175 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHGDHO43175 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHGDHO43175 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHGDHO43175 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHGDHO43175 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHGDHO43175 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHGDHO43175 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PHGDHO43175 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PHGDHO43175 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHGDHO43175 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHGDHO43175 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHGDHO43175 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHGDHO43175 AC003669.1-201ENST00000334569 611 ntBASIC17.11■□□□□ 0.33
PHGDHO43175 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PHGDHO43175 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHGDHO43175 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.11■□□□□ 0.33
PHGDHO43175 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PHGDHO43175 AP002383.4-201ENST00000442518 975 ntBASIC17.11■□□□□ 0.33
PHGDHO43175 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.11■□□□□ 0.33
PHGDHO43175 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.11■□□□□ 0.33
PHGDHO43175 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.11■□□□□ 0.33
PHGDHO43175 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.11■□□□□ 0.33
PHGDHO43175 TPSP2-201ENST00000561760 610 ntBASIC17.11■□□□□ 0.33
PHGDHO43175 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.11■□□□□ 0.33
PHGDHO43175 AC073592.5-201ENST00000624854 528 ntBASIC17.11■□□□□ 0.33
PHGDHO43175 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHGDHO43175 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms