Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.14■□□□□ 0.17
NTN3O00634 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.14■□□□□ 0.17
NTN3O00634 AP001350.2-201ENST00000625104 1094 ntBASIC16.14■□□□□ 0.17
NTN3O00634 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.14■□□□□ 0.17
NTN3O00634 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NTN3O00634 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NTN3O00634 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NTN3O00634 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NTN3O00634 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.14■□□□□ 0.17
NTN3O00634 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NTN3O00634 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NTN3O00634 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NTN3O00634 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.14■□□□□ 0.17
NTN3O00634 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NTN3O00634 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NTN3O00634 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NTN3O00634 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NTN3O00634 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
NTN3O00634 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NTN3O00634 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NTN3O00634 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
NTN3O00634 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NTN3O00634 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NTN3O00634 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NTN3O00634 MIR661-201ENST00000384842 89 ntBASIC16.13■□□□□ 0.17
NTN3O00634 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NTN3O00634 AC236430.1-201ENST00000402231 743 ntBASIC16.13■□□□□ 0.17
NTN3O00634 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
NTN3O00634 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.13■□□□□ 0.17
NTN3O00634 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NTN3O00634 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.13■□□□□ 0.17
NTN3O00634 AC002472.2-201ENST00000442739 958 ntBASIC16.13■□□□□ 0.17
NTN3O00634 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NTN3O00634 TSPY16P-201ENST00000449843 468 ntBASIC16.13■□□□□ 0.17
NTN3O00634 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.13■□□□□ 0.17
NTN3O00634 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NTN3O00634 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.13■□□□□ 0.17
NTN3O00634 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.13■□□□□ 0.17
NTN3O00634 MPDU1-223ENST00000582151 728 ntBASIC16.13■□□□□ 0.17
NTN3O00634 RN7SL204P-201ENST00000582831 262 ntBASIC16.13■□□□□ 0.17
NTN3O00634 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.13■□□□□ 0.17
NTN3O00634 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NTN3O00634 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.13■□□□□ 0.17
NTN3O00634 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NTN3O00634 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NTN3O00634 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NTN3O00634 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NTN3O00634 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NTN3O00634 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NTN3O00634 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.13■□□□□ 0.17
NTN3O00634 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NTN3O00634 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NTN3O00634 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.13■□□□□ 0.17
NTN3O00634 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NTN3O00634 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NTN3O00634 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NTN3O00634 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.12■□□□□ 0.17
NTN3O00634 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NTN3O00634 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NTN3O00634 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NTN3O00634 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NTN3O00634 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.12■□□□□ 0.17
NTN3O00634 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.12■□□□□ 0.17
NTN3O00634 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.12■□□□□ 0.17
NTN3O00634 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NTN3O00634 AC131009.4-201ENST00000624048 1740 ntBASIC16.12■□□□□ 0.17
NTN3O00634 AC093525.9-201ENST00000624961 1746 ntBASIC16.12■□□□□ 0.17
NTN3O00634 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.12■□□□□ 0.17
NTN3O00634 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NTN3O00634 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NTN3O00634 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NTN3O00634 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.12■□□□□ 0.17
NTN3O00634 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NTN3O00634 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.12■□□□□ 0.17
NTN3O00634 UGT1A2P-201ENST00000454886 866 ntBASIC16.12■□□□□ 0.17
NTN3O00634 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.12■□□□□ 0.17
NTN3O00634 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.12■□□□□ 0.17
NTN3O00634 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.12■□□□□ 0.17
NTN3O00634 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.12■□□□□ 0.17
NTN3O00634 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NTN3O00634 MIR6080-201ENST00000617359 66 ntBASIC16.12■□□□□ 0.17
NTN3O00634 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NTN3O00634 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.12■□□□□ 0.17
NTN3O00634 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NTN3O00634 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NTN3O00634 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NTN3O00634 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.12■□□□□ 0.17
NTN3O00634 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NTN3O00634 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NTN3O00634 AC016027.1-202ENST00000607927 1699 ntBASIC16.11■□□□□ 0.17
NTN3O00634 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NTN3O00634 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
NTN3O00634 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NTN3O00634 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NTN3O00634 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.11■□□□□ 0.17
NTN3O00634 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.11■□□□□ 0.17
NTN3O00634 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.11■□□□□ 0.17
NTN3O00634 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NTN3O00634 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NTN3O00634 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms