Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC7O00311 AC079776.2-201ENST00000641154 1609 ntBASIC16.88■□□□□ 0.29
CDC7O00311 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.88■□□□□ 0.29
CDC7O00311 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDC7O00311 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC7O00311 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.88■□□□□ 0.29
CDC7O00311 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC7O00311 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.88■□□□□ 0.29
CDC7O00311 AC097637.2-201ENST00000624096 1997 ntBASIC16.88■□□□□ 0.29
CDC7O00311 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.88■□□□□ 0.29
CDC7O00311 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC7O00311 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.88■□□□□ 0.29
CDC7O00311 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CDC7O00311 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CDC7O00311 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDC7O00311 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDC7O00311 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CDC7O00311 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.88■□□□□ 0.29
CDC7O00311 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC7O00311 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDC7O00311 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDC7O00311 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.88■□□□□ 0.29
CDC7O00311 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.88■□□□□ 0.29
CDC7O00311 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.88■□□□□ 0.29
CDC7O00311 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.88■□□□□ 0.29
CDC7O00311 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC7O00311 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDC7O00311 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.88■□□□□ 0.29
CDC7O00311 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC7O00311 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC7O00311 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CDC7O00311 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDC7O00311 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDC7O00311 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDC7O00311 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.87■□□□□ 0.29
CDC7O00311 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDC7O00311 AP005117.1-201ENST00000584346 1413 ntBASIC16.87■□□□□ 0.29
CDC7O00311 SIGLEC16-201ENST00000599858 1437 ntBASIC16.87■□□□□ 0.29
CDC7O00311 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDC7O00311 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC7O00311 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC7O00311 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC7O00311 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC7O00311 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDC7O00311 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CDC7O00311 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.87■□□□□ 0.29
CDC7O00311 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CDC7O00311 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
CDC7O00311 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC7O00311 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CDC7O00311 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.87■□□□□ 0.29
CDC7O00311 AL732292.2-201ENST00000609649 430 ntBASIC16.87■□□□□ 0.29
CDC7O00311 AC073592.4-201ENST00000623827 446 ntBASIC16.87■□□□□ 0.29
CDC7O00311 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDC7O00311 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC7O00311 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC7O00311 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDC7O00311 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC7O00311 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC7O00311 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
CDC7O00311 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.87■□□□□ 0.29
CDC7O00311 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDC7O00311 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC7O00311 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CDC7O00311 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC7O00311 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC7O00311 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CDC7O00311 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC7O00311 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDC7O00311 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC7O00311 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC7O00311 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CDC7O00311 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC7O00311 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDC7O00311 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CDC7O00311 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.86■□□□□ 0.29
CDC7O00311 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC7O00311 AC078925.2-201ENST00000624013 1973 ntBASIC16.86■□□□□ 0.29
CDC7O00311 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CDC7O00311 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDC7O00311 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC7O00311 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.86■□□□□ 0.29
CDC7O00311 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC7O00311 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC7O00311 ACTG1P4-201ENST00000425123 1122 ntBASIC16.86■□□□□ 0.29
CDC7O00311 HCG4P8-203ENST00000443049 980 ntBASIC16.86■□□□□ 0.29
CDC7O00311 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDC7O00311 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.86■□□□□ 0.29
CDC7O00311 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.86■□□□□ 0.29
CDC7O00311 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CDC7O00311 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC7O00311 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC7O00311 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDC7O00311 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDC7O00311 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC7O00311 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.86■□□□□ 0.29
CDC7O00311 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.86■□□□□ 0.29
CDC7O00311 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC7O00311 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDC7O00311 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms