Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 AC079328.2-201ENST00000561241 3354 ntBASIC16.24■□□□□ 0.19
CLIC1O00299 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLIC1O00299 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLIC1O00299 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLIC1O00299 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLIC1O00299 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLIC1O00299 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLIC1O00299 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CLIC1O00299 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CLIC1O00299 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLIC1O00299 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CLIC1O00299 DOC2GP-204ENST00000639052 2548 ntBASIC16.23■□□□□ 0.19
CLIC1O00299 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.23■□□□□ 0.19
CLIC1O00299 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.23■□□□□ 0.19
CLIC1O00299 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLIC1O00299 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.23■□□□□ 0.19
CLIC1O00299 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLIC1O00299 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLIC1O00299 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.23■□□□□ 0.19
CLIC1O00299 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CLIC1O00299 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLIC1O00299 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLIC1O00299 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLIC1O00299 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLIC1O00299 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CLIC1O00299 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.23■□□□□ 0.19
CLIC1O00299 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.23■□□□□ 0.19
CLIC1O00299 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.23■□□□□ 0.19
CLIC1O00299 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.23■□□□□ 0.19
CLIC1O00299 AC246785.2-201ENST00000432512 513 ntBASIC16.23■□□□□ 0.19
CLIC1O00299 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.23■□□□□ 0.19
CLIC1O00299 KRT8P26-201ENST00000534154 1276 ntBASIC16.23■□□□□ 0.19
CLIC1O00299 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLIC1O00299 AC009533.2-201ENST00000543664 586 ntBASIC16.23■□□□□ 0.19
CLIC1O00299 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLIC1O00299 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.23■□□□□ 0.19
CLIC1O00299 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLIC1O00299 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLIC1O00299 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CLIC1O00299 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.23■□□□□ 0.19
CLIC1O00299 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLIC1O00299 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLIC1O00299 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CLIC1O00299 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLIC1O00299 FRMD8P1-201ENST00000440433 1524 ntBASIC16.23■□□□□ 0.19
CLIC1O00299 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLIC1O00299 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLIC1O00299 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLIC1O00299 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLIC1O00299 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLIC1O00299 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CLIC1O00299 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CLIC1O00299 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLIC1O00299 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.23■□□□□ 0.19
CLIC1O00299 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.23■□□□□ 0.19
CLIC1O00299 GPR89P-201ENST00000407924 1495 ntBASIC16.22■□□□□ 0.19
CLIC1O00299 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLIC1O00299 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLIC1O00299 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLIC1O00299 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLIC1O00299 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLIC1O00299 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLIC1O00299 PCDH8P1-201ENST00000428983 2773 ntBASIC16.22■□□□□ 0.19
CLIC1O00299 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
CLIC1O00299 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLIC1O00299 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLIC1O00299 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLIC1O00299 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CLIC1O00299 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLIC1O00299 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLIC1O00299 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLIC1O00299 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLIC1O00299 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.22■□□□□ 0.19
CLIC1O00299 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLIC1O00299 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.22■□□□□ 0.19
CLIC1O00299 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.22■□□□□ 0.19
CLIC1O00299 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.22■□□□□ 0.19
CLIC1O00299 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.22■□□□□ 0.19
CLIC1O00299 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.22■□□□□ 0.19
CLIC1O00299 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLIC1O00299 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.22■□□□□ 0.19
CLIC1O00299 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CLIC1O00299 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CLIC1O00299 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLIC1O00299 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLIC1O00299 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLIC1O00299 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLIC1O00299 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLIC1O00299 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CLIC1O00299 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.22■□□□□ 0.19
CLIC1O00299 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLIC1O00299 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CLIC1O00299 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLIC1O00299 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.21■□□□□ 0.19
CLIC1O00299 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLIC1O00299 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLIC1O00299 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CLIC1O00299 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLIC1O00299 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLIC1O00299 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms